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Mutant Lines
GT15957

GT15957

CSHL Arabidopsis genetrap mutant lines

Original: GT15957

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15957

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 141776 [Map]; Strand: w
  - AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
    Distance: 133; Region: intergenic
  - AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
    Distance: 825; Region: intergenic
Flanking Genome Sequence: GT15957 - 3-prime edge
```
TTTACCGACC GTTACCGACC GTTTTCTCCC TACACTAAAC GTTCACTGGT 
TTGTAAGATA AAAGCCAGTA AAGAGAAGAA AAAGGAAATA ACAAAAGGAA 
GAAACAGAGT TTAGAGTTTT TAGCAAACTT GTAGCAGCTT GATTGCCTGA 
AACATGTCCA TGGCTGAGAA ACCAGAAAAG ATCATCTAAC GGAAAGTAAA 
TGACAAGTTG ATGTCATCAG AGATTATTTG GACCTCACAC TTGGCTGGAG 
CTACTCTAGG AAGCTTCTTA AGTTTCTTGA ACACC
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 141865 [Map]; Strand: w
- AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: 222; Region: intergenic
- AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
  Distance: 736; Region: intergenic

GTGTTCTTTT GTTGGTTTCA GTAATGAATT TGTGTTTTTT ATGTTTTTAA 
TTTGACGTGA TAGAAACTTG CTTGTCAGGT TAAACCAAAT CAAACACCAT 
AATTTATTTA GTTAGGTCTG CAAATATTAG GTCGTTGACT CTAATATCTA 
ACTGCTTCAG TTTCATCAAA CCTCTAAGCA CCAAAGATGC AACAACTAAT 
ATTGAACAAG ACTCAAAAAG CGTTAGAAAA CACTACATAA CGTACCTTCA 
GTTGAATGAA GCTCATTGTG ACTGAGATCT AACATTTGGA CAAATATAGC 
AACTTCTCGA CCGCGGCTAT CCGAGATAGT GTTAAGTTAC TGAGCCTTAG 
ACATACAATA TTATTCAT

AT4G00320.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G41830.1); Has 1728 Blast hits to 1676 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00330.1

Model type: Protein coding
Short Description: calmodulin-binding receptor-like cytoplasmic kinase 2
Curator Summary: high overall homology to CRCK1
Computational Description: calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR