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GT15969

CSHL Arabidopsis genetrap mutant lines

Original: GT15969

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15969

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17507421 [Map]; Strand: c
      • AT2G41940.1 - [+] show detail - zinc finger protein 8
        Distance: -88; Region: promoter
    Flanking Genome Sequence: GT15969 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTGCA GGGGTTAAAT 
    AGCAATTATG TATTTACCTT AAAAAGATTT GGGAACCTCT CTTTAAATTA 
    ATGCAAAACC TCATCTCTTG TCTTTCTGTC TCTGAAACAG TCAACCTCAT 
    TCTTCTCAAA CTCACTCTCC CTGATCTCTC TCTTCCATGG ACGAAACCAA 
    CGGACGAAGA GAAACTCACG ATTTCATGAA CGTCAACGTT GAATCCTTCT 
    CTCAGCTTCC TTTCATCCGC CGTACTCCTC CCAAAGAAAA AGCCGCCATT 
    ATTCATCTCA CTCGAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17507350 [Map]; Strand: c
      • AT2G41940.1 - [+] show detail - zinc finger protein 8
        Distance: -159; Region: promoter
    Flanking Genome Sequence: GT15969 - 5-prime edge 
    CTTTCTCCCT GCCTGCAGCA TGGCCGCGTG CGTGATTTTA CGTTTATCCA 
    CCTATATATA TAGCTAAAGA ATGATCCACA TTTCACTTGT ACATATTTTT 
    CAAAATAAAT AAATCTACTT CTTCATTAGT TTTTTTATGA TCTCAATTTT 
    TTCATTAGTA TATTAGATTT TTCCTTTTGA AAATCAAACC TCATAGAATT 
    TTAAAATTGA CTCCATGGGG CATGTTTATA TTTTATTTTT TTCGTTAGTT 
    CATGTTTATA TAAACCTGCA ATTATGGTTG GAAAAAAAAA AAAATTTTTT 
    GGGTTGGGGA GCTTGGGGAA CCTAAATTGG GGGGTTTTTG GGGAGCCTGG 
    CCCTTTTCTT TTGGGTTCCC GGTTTTTTTG GGGGTAAAAT TGGGGCTTAC 
    AAAAAATTTT ACCCGGGGGG CGGGGGGGGA AAAAAAGGCC GGAAAAAATC 
    CTTCCATTTT TGGGGGGGCC CTTAAACCAA TTTCCCTTCC CCCCCCAAAA 
    AAATTTTTTT TTGGGCTTTC TTTTCCAAAT TTCCTTTTTA TTAAAAAAAA 
    ACCC

AT2G41940.1

Model type
Protein coding
Short Description
zinc finger protein 8
Curator Summary
Encodes a zinc finger protein containing only a single zinc finger.
Computational Description
zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR