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GT15993

CSHL Arabidopsis genetrap mutant lines

Original: GT15993

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15993

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 116763 [Map]; Strand: c
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15993 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCCTCAA CAGTCCTTCC 
    ATCAACACGC AGGTCGACTG GATCAGCAGC CTTATCCTGT TTATTATGTC 
    ACTGCTCCTG TCCCACCTAG GCCCTACAGT ATGCCTGTGC CACAATCTCC 
    AAGTGTGAGC GATGCTCCAG GGTCTATCCC CTCTAACCAT CCCAACTCTA 
    CCATGATGCC TCCACCTCCT AACAACCACA TGAGAAGTGT TAGCAGTGGC 
    AAACCTGAGA TGGGACAGGC TGGGGTTTAC ACAACAGCCC CAGGTGTGGG 
    CGGTGCTCAG ATGGTTCACC AGATTCCCAC AAACCAGCAG CAATTCATGG 
    GGTATTCGCA GATCCGTCAC CCTCCTCAGT CTGGTTCAGC TGGGAATCCA 
    AACTATGGAT ATGAATATGT CGACAATGCT CATACACAGA TATACTACAC 
    TCAACCTATG GGACATGCAC AGTACCAGAC AATGACTGGG CCTCCACCTG 
    CCATGGTGAT GCCTGATGGT TCTGCTGCTG CTAAGCTTCC AGCTGAGAAC 
    ATGACTCAAC AGATCCGGAG TTCACAGCCA TTGTGACACC ACAAGGAACA 
    CATGAAGATG AACCACAAAA TTTTGGAGGA AGAAAACTCC GGGTTGGTTT 
    TTAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 116439 [Map]; Strand: c
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15993 - 5-prime edge 
    AAAAGGTATC TGAGCAATTG GTTCTTGATA GACAGATGGT CTTTGGTGAA 
    ACATTGGGTT GCTCATACTG CTATCACTGA GGCATTCATT ATATAGCAAA 
    CACACAATCA GAGTTCTGAC CAATCTTAGT TCTTCTATAG CATCAAATTA 
    AGGCTCATGA GGGTTCCAAT ATAAGAAGAA AGAGTACCTG GAAACGGAAT 
    TGGGTGATGG CAGCTCGTGT CCACCACCGC TATTTGATTT CAGCTGATGA 
    GCCTGCTGAG GCGGTAGATT CTGCGGCTGC CATCGCGGAG TCGGAGGCTT 
    CCTGTATCCA GCCTGCACGC CGTGATCGGA TCTCT

AT2G01190.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link
InterPro Scan - TAIR