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GT16000

CSHL Arabidopsis genetrap mutant lines

Original: GT16000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16000

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 121570 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16000 - 5-prime edge 
    CTTTCTCGCG GTTCCGATGA TCCTACAGGT TCTCTTAACA ATTGGAACTC 
    ATCAGACGAG AACGCCTGTT CGTGGAACGG TGTAACTTGC AAAGAACTCA 
    GGGTGGTGTC TCTAAGCATT CCAAGGAAGA ATCTTTACGG TTCTCTCCCT 
    TCGTCTCTAG GGTTTCTCTC CAGTCTCCGT CACTTGAATC TCCGGAGCAA 
    TAGGTTTTAT GGGTCGTTGC CTATTCAGCT TTTCCACCTT CAGGGACTCC 
    AAAGTCTAGT CCTTTACGGC AATTCCTTTG ATGGGTCATT GTCGGAAGAG 
    ATCGGTAAGC TTAAGCTTCT TCAGACCTTA GATTTGTCAC AGAATCTCTT 
    CAACGGGTCG TTACCACTTT CGATTCTGCA ATGCAACAGA CTTAAAACAC 
    TCGATGTCAG CAGAAACAAC TTGTCTGGTC CTTTGCCTGA TGGGTTTGGC 
    TCAGCGTTCG TCTCTCTGGA GAAACTCGAC CTCGCCTTCA ACCAATTCAA 
    CGGCTCCATC CCCAGCGACA TTGGAAACCT CTCCAACCTT CAAGGAACTG 
    CTGATTTCTC TCATAATCAA TTCACCGGCT CAATCCCACC TGCCCTTGGA 
    GATCTTCCTG AAAAGGTTTA CATTGATCTC ACTTTCAACA ATCTCTCCGG 
    TCCCATTCCT CAAACCG

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR