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GT16004

CSHL Arabidopsis genetrap mutant lines

Original: GT16004

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16004

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 980975 [Map]; Strand: w
      • AT2G03240.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: -3638; Region: intergenic
      • AT2G03250.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: 1198; Region: intergenic
    Flanking Genome Sequence: GT16004 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTTTA TGGTGGTTCA 
    ACGCAAAATC ATGGTTCCTA TTTCTACCGG TAGAGTTGAT AGGAGGTTCT 
    GCTTTAGGTC AAGTTCTGCT TTGTTGAATT CTAGATAAGT CGAAAATGTA 
    GATATCTAAT AGAACACGAG TTCGATCGTT GGAAGGGAAT AATTTATTAA 
    ATACTGGTCT CAACTCTAGA AAATATATAA TCTAGGCCCG AAATTTTCTT 
    ACTAGTATAA AATATATTTG ATAACAAAG

AT2G03240.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1164 Blast hits to 1104 proteins in 198 species: Archae - 0; Bacteria - 4; Metazoa - 278; Fungi - 369; Plants - 375; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03250.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR