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GT16029

CSHL Arabidopsis genetrap mutant lines

Original: GT16029

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16029

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1432373 [Map]; Strand: c
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16029 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGAAAGTG GATTCCCAGT 
    CAACGTCGTT GACTTCAGAG CGAAGAGAGT CAAGACCTCT GTTCTTAATC 
    GATTCCTTGA ATCTCTCTTC CATGCACTTC TTGTAATGTT CCTTGGTCAT 
    CTTCTCCACT TTGTCCAAAA GCTCGAGTGA AATCCCATGG TTCACACACT 
    GTAATATCAC AAACAGATGA TTAGATTTTG AGTTACACAA TTTTATAGAA 
    CAAAAGAAAA GTGAGAGTAC CTCAAAGAAG CCCCAGTTTT CACAAGCGTC 
    TTTGATCTTC TCCATAGTGA TTGCTCTCTC TTCTCCATTA AGCTTCTCGA 
    GATTGATGAT CGGGAAACTC TTCATCTCTC TC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1432247 [Map]; Strand: c
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16029 - 5-prime edge 
    TGTCCCTGAT CTCGACGACG ATTACAGGTA ACCTTTTTTA GTTTCGTACC 
    GGCCCGTTTT TTACCTTAAC CGGTTACAGG ATCTCAGATT TACTGGTTTT 
    CAAAACAACT CAGCATGAAC CGGTTTTTTT CTTTTGGTTT TAAGTAAAAG 
    TTTAACCGGT GTTATTGTCT TTCTACAGAA CGTTAATGAA AGACTTCGCC 
    GGAAAGATAG AGAAGTTGTC GGAGGAGCTA CTGGATCTGC TGTGCGAGAA 
    TCTCGGTTTA GAGAAGGGTT ATTTAAAAAA GGTGTTTTAC GGGTCGAAAA 
    GACCGACTTT TGGAACCAAA GTCAGCAATT ATCCACCTTG TCCTAATCCG 
    GACCTAGTCA AGGGTCTCCG AGCCCACACC GACGCCGGCG GCATCATCCT 
    CCTCTTCCAA GACGACAAAG TCAGTGGACT TCAGCTTCTT AAAGACGGCG 
    AGTGGGTCGA TGTTCCTCCG GTTAAGCATT CAATCGTCGT TAATCTCGGC 
    GATCAACTTG AGGTAACTAC TGAACCAAAC CGTACTAAAC CGAACCAAAT 
    TGAAATAAGA ATTTTGAGTT TTAATTTTGG ATTGATTAAA CCAGGTGATA 
    ACCAATGGGA AGTACAAGAG T

AT1G05010.1

Model type
Protein coding
Short Description
ethylene-forming enzyme
Curator Summary
Encodes 1-aminocyclopropane-1-carboxylate oxidase
Computational Description
ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).
Link
InterPro Scan - TAIR