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Mutant Lines
GT16039

GT16039

CSHL Arabidopsis genetrap mutant lines

Original: GT16039

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16039

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 864438 [Map]; Strand: w
  - AT2G02960.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -32; Region: promoter
  - AT2G02960.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -42; Region: promoter
  - AT2G02960.3 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -74; Region: promoter
  - AT2G02960.4 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G02960.5 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -79; Region: promoter
Flanking Genome Sequence: GT16039 - 3-prime edge
```
AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATT 
CTCCGCTATA AAAAGCGATT TTTCTATTGT AGCTCGATTT GCGGGAAAAT 
CTTGCATCTG CCTCAGAAAA TTTTCTGGCG AGCTTTCACC AATTAGTTCA 
TCTCACTCGA CC
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 864433 [Map]; Strand: w
  - AT2G02960.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -27; Region: promoter
  - AT2G02960.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -37; Region: promoter
  - AT2G02960.3 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -69; Region: promoter
  - AT2G02960.4 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G02960.5 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -74; Region: promoter
Flanking Genome Sequence: GT16039 - 3-prime edge
```
GGTAGAGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATTCTCCG 
CTATAAAAAG CGATTTTTCT ATTGTAGCTC GATTTGCGGG AAAATCTTGC 
ATCTGCCTCA GAAAATTTTC TGGGGAGCTT TCACCAATTA GTTCATCCTC 
ACTCGA
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 7435871 [Map]; Strand: w
- AT1G21240.1 - [+] show detail - wall associated kinase 3
  Distance: 0; Region: exon3 (CDS)
- AT1G21245.1 - [+] show detail - Protein kinase superfamily protein
  Distance: -971; Region: promoter

ATAAAGAAAG CTCGGCTTGC AGACAGTAGC CAAGTAGATC AGTTCATCCA 
CCAAGAGCAC GTGCTTTCAC AAATTAACCA CAGGAACGTG GTCAAGATCT 
TGGGTTGCTG TCTAGAGACT GAAGTCCCCT TGTTGGTCTA TGAATTCATT 
ACCAATGGCA CCCTTTTCGA TCACTTGCAC GGTTCCATGT TTGATTCTCC 
TCTCACGAGG AAACACCGCC TCAGAATAGC GATAGAAGTC GCTGGAACTC 
TTGCTTATCT TCACTCCTCT GCTTCTATTC CAATCATCCA TCGCGATATC 
AAAACTGCAA ATATTCTCTT GGATGAAAAC TTAACTGCAA AAGTAGCCGA 
CTTTGGCGCT TCGAAGCTTA TACCAATGGA TAAAGAGCAG CTCACAACTA 
TGGTGCAAGG CACTCTAGGC TATTTAGACC CAGAATACTA TACCACAGGG 
CTTCTGAACG AGAAGAGCGA TGTGTATAGC TTTGGGGTAG TCCTCATGGA 
ACTGCTCTCA GGTCAAAAGG CATTGTGCTT TGAACGGCCA CAGGCTTCAA 
AACATCTGGT GAGTTACTTT GCGACTGCCA CAAAAGAGAA TACGTTGGAT 
GAGATTATTG ACGGCCAAGT GATGAACGAG GATAATCTGA GGGAGATCCA 
GGAAGCTGCA AGAATTGCTG CAGAGTGTAC AAGGCTAACG GGAGAGGAAA 
GGCCAAAGAT GAAACAAGTA GCTGCAGAGC TAGAAGCCTT GAGAGTCAAA 
AAAAACATAC GTAA

AT1G21240.1

Model type: Protein coding
Short Description: wall associated kinase 3
Curator Summary: encodes a wall-associated kinase
Computational Description: wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21245.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 18774 Blast hits to 18543 proteins in 473 species: Archae - 0; Bacteria - 447; Metazoa - 261; Fungi - 0; Plants - 17989; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.3

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.4

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.5

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR