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GT16064

CSHL Arabidopsis genetrap mutant lines

Original: GT16064

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16064

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 405023 [Map]; Strand: c
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -895; Region: promoter
    Flanking Genome Sequence: GT16064 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATC 
    CATAATATAT AATTTGAGGG ACCTATTAAA AGACTAACAA AATAAAACTG 
    TTGAAATGAC TTGCAAGTTA CAAACAGAGC ACCAAAGTGA TACGACGAAT 
    ATTTCCCATA CAATGTCACC ACTAGCCATC ATTATTGGTG AATTGATTAG 
    CTGCTCAAAT TATAAGCCGA ATAGAGAAAT TAATAATATC GAGATTAATA 
    TATCGTTAAA CAAATAAAAG TAAGCCTTTG AATAAAAATA TGTAGAGGTC 
    CACAGTGATT AGACCGACCA AAAAATAACA ATATTTAATT TCACTGCTAT 
    AAGAAAGTTT ATGACATAAT GATAAGATTC AAAGACCAAA ATAGTAGAAT 
    TCTATAATTA GAGGAAAATA CTATTTTCTT TTCTCATTAT ACTATACTTG 
    CCAGCCCATT TTGTCATTTA TCATGAAAAT TAAATTGTTT TACATATCTT 
    CATTTAAAAT GTTTATAGTA ACAAGTTGGA CCCTCCTCGT TATCAAAGGT 
    AATCGCCTTC AGTGTTTAAT AAAGTAATAC GATTGAGGAC ACAAAGTGAA 
    TGGTTTAAAA TTAATTTCCG TGGGATTTAA AGACGAATAC AATGTGATCA 
    AGGTGGTTTG ACGTCTAACT ATAGCTAGTC TAAACTAGCT AGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 404966 [Map]; Strand: c
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -952; Region: promoter
    Flanking Genome Sequence: GT16064 - 5-prime edge 
    CTTTCTCCCT GATTATGGAG TACACAGAAG CACATGACTC TGCAATAGTA 
    TCTAACCTAA CTAAGAAAGA ACAATAACAG TAAGTTATGC AACTCGTATA 
    TGTACTAACC AGAGGAGTTA GTAACTTGCA TAATAAGATT TTAATTTTCC 
    AATTGGCAGT AGGAGAGATG GAATTTGATT TTTTTCTTTC TAAAATGGCA 
    ACTGTTACGA GAAGATAATT TGTTCGTAAG C

AT2G01900.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Link
InterPro Scan - TAIR