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GT16091

CSHL Arabidopsis genetrap mutant lines

Original: GT16091

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16091

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16288396 [Map]; Strand: c
      • AT4G33985.1 - [+] show detail - Protein of unknown function (DUF1685)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16091 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCACCC CTAGTCTCCG GATCATCACC 
    TTTTCAATTT CAATTCTCCT CCGTCAGATT TTTTAAAAAA CAGAAATACT 
    AACAAAATAA AGAGGAATCA GAAAATTCAA AATTCACATA CCTTGATCAA 
    CGATCGTCGT GCTGGAATTG CTGTTTTCAC CTTCCGATGA CATCGACGAA 
    AGAGACGAAG TCCGTGACAA TCTGCTACTA TACTGTTTAT TGACGGCGCA 
    GTATAAACCA AGAGCTGGAA GAGTTTCCGA GAGCCTCGGA TCTAAATCAG 
    GCGAATCCGG CTCGAATCCA AATCCAAGCT CGATGCATCC CTTGAGCTCT 
    TCTAGATCTT CGCCCGTCAC GCTCTTACTC CAACCGAGTC CGCCCAATGA 
    TTGCTTCCCC TTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16288324 [Map]; Strand: c
      • AT4G33985.1 - [+] show detail - Protein of unknown function (DUF1685)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16091 - 5-prime edge 
    CTTTCTCCCT GCCGGAGACG ATGAAGCTGA GGTTGAAGCA ATGGGCTCAG 
    GTGGTTGCTT GTTCGGTGAA GCAATTCTCC GGCGAACCGA ATTGATGTTT 
    GAATCATGAT GATTAAGGAT AATAATCCCT TTAATTTTTT TATAATTACC 
    TCTTGAGAAA TTATTGTTTG TTCTGATGTG ATGTACAGAG GAATGACAGT 
    TTTGTAAAAT AGATGCGAAT TTAGAATATT CAAATTTTGA ATCTAATGGT 
    TAACCAAACA AAAATATTAT AATTTCATTC TTCTTAATGT GATTTTCAGT 
    CATTGTTCTT TGCTTTCTTT TATTTTGTGT GTGTGTGTTT GTAACTTCGT 
    AGTGTTT

AT4G33985.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1685)
Computational Description
Protein of unknown function (DUF1685); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G15590.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR