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GT16106

CSHL Arabidopsis genetrap mutant lines

Original: GT16106

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16106

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9497284 [Map]; Strand: c
      • AT4G16880.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16106 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    ATCCTGAGAT GGAGACACAT TCAAGAGATA TTTTTGAAGA TTGAATTTTT 
    GTGGTTGTCA CTGAATTATG ATAAGTCTTA GTCTTTGTAC AAGACAGAAA 
    TAATATTTCA ATTTATCGTA ATTTCTAGGC AAGTAGACAG AAACTTACAT 
    TCGTTTCATC TACAAAGATA TGTTGAAAAC ACAAATTTTG TGGTTGTCAG 
    TTGTCCTTGT ACAAGACATT TTATCGTGAG AATGTACTTA TGATTGTTTA 
    ATATCAAAGT CTTGTTTCCC AATACATACA TGCACAGGGA TTAGGAGAAT 
    AAGTATATCG ATTATGAGGA TTTTAATTCA AATAATACAG TGAAAATACT 
    AATTAACACT AACTCTCTAG TTTGCTAAAT TACTCTTTTA GTTTTCAATA 
    ATTGTATTAT TAGTTTAAAG TTTGGCTTAC TGCGTCAGCA ACCACTGTAG 
    GCTGCGATTG CATTTGCTGT ATTGTTTAAG GAGCATTTGG TTTCTAAGGG 
    TTTCATGTAC TGGATGGAAG AACTCGTGTC TGAGAACATC CTCTGCGCTG 
    GTTCGTTGCC TCGGGTTAAC GGTCAAACAT CTATCCACGA AGTCAAGGAG 
    CGGCCGTGGG ATTGCGTCTA GAAACT

AT4G16880.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16940.1); Has 2574 Blast hits to 2178 proteins in 46 species: Archae - 0; Bacteria - 11; Metazoa - 1; Fungi - 0; Plants - 2558; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR