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Mutant Lines
GT16143

GT16143

CSHL Arabidopsis genetrap mutant lines

Original: GT16143

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16143

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 90494 [Map]; Strand: c
- AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
  Distance: 0; Region: intron1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACGTTTA ATTATATGAT 
TAGTACTATT TATGATGGGA AATTGCAACA GTTTTAAGTT GATCTACTGT 
CTCTATATCG TCACGTTGAT CATTTTATTT TAATCATTTT CTATGTAATT 
ATGTTTTTAA CTTCTTTTTT TTTGGAAAAA AATGGGGTTT CCAACTTTTT 
TTTTTAAAAA GGAATTTTTC CTTTTGGCTT AAGGGTCAAT TAAACCACAA 
AGGTAAGGCC TTTTTCCCCT TCCAGGGGAC CCCCCCGAAT GGCCTTTCCA 
GGAACCAACC CCCTCCGGGA AGGGGGGAAA ATACCCTTTT TTAAGGACCG 
ATTTTTTTTT AAAACCCTCC CCAATTGGCC TTTAAAGGGA AAAAATTTTT 
TGTTTTTGCC CGGGCCCAAA ACCCCCTTTT CTTTAAAAAA AGGGGGTTAA 
AAACCCAAAA TTTTCCCACG GGGGTCCGGG CCTTTGCCTT TTGGGAAAAA 
TTTTTTTTTT AAAAAAAAAG GCGGGGCCTG GAGCCTTTTT TTTTGGGAAA 
AAAA

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 3681614 [Map]; Strand: c
  - AT1G11040.1 - [+] show detail - HSP40/DnaJ peptide-binding protein
    Distance: -690; Region: promoter
  - AT1G11050.1 - [+] show detail - Protein kinase superfamily protein
    Distance: -274; Region: promoter
Flanking Genome Sequence: GT16143 - 5-prime edge
```
AACGATGAAT GAAAATATTC CATAGTGGCT ACCTTTCACT TTCGTTTTTA 
ATGTTCAATG TGGGAAAATT GAAAAAGCAA AATTAATAGA TAGTACTAGG 
ATTATAAAAT TCTGACAAAA TTAATGGGAC AAAAATTTCA GACGGTAAGA 
CAAA
```

AT1G11040.1

Model type: Protein coding
Short Description: HSP40/DnaJ peptide-binding protein
Computational Description: HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11050.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00220.1

Model type: Protein coding
Short Description: Lateral organ boundaries (LOB) domain family protein
Curator Summary: Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description: JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR