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GT16154

CSHL Arabidopsis genetrap mutant lines

Original: GT16154

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16154

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16154 - 3-prime edge 
    CCAAAGCGGT CGGACAGTGC TCCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 328060 [Map]; Strand: c
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -245; Region: promoter
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -29; Region: promoter
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -29; Region: promoter
    Flanking Genome Sequence: GT16154 - 3-prime edge 
    GACCGTTACC GACCGTTTTC ATCCCTAGTG ACTTAGCATA AACCTCTGTT 
    AAAGCCTTCT CTACCAAAAA AAACTAGCTG TTTCTCTTTT GTTTTT

AT2G01740.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.1

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1); Has 32985 Blast hits to 20590 proteins in 1788 species: Archae - 429; Bacteria - 4222; Metazoa - 17320; Fungi - 2752; Plants - 1806; Viruses - 150; Other Eukaryotes - 6306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.2

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1).
Link
InterPro Scan - TAIR