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GT16166

CSHL Arabidopsis genetrap mutant lines

Original: GT16166

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16166

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 198226 [Map]; Strand: w
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon7 (3UTR)
      • AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon8 (3UTR)
      • AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: GT16166 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAATCTGAG TGAGTAATAC 
    AAACTATCTA CATGGTTCTA TGCTAAAAAT AATTAGCAAT GGTGACAGTG 
    AGGCTATGTT CAGAGCTTGC AGCTGTCTCA ACAATGGCTT TGTCTTTAAG 
    AAAAGAGTTT TCATCTTACT CGACCATTCT AGAATAAGGA TGCTCCCATC 
    CGTCTTCAAC TCAGGTGAAA CCAGAGAGTG CTCACTGTTG TT

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR