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GT16167

CSHL Arabidopsis genetrap mutant lines

Original: GT16167

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16167

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2776254 [Map]; Strand: c
      • AT3G09070.1 - [+] show detail - Protein of unknown function (DUF740)
        Distance: -5080; Region: intergenic
      • AT3G09080.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 5; Region: intergenic
    Flanking Genome Sequence: GT16167 - 5-prime edge 
    CTTTCTCCCT GGCCAGATAA TGCTTGAGCA CAAAAATAGA ACTAGTGATA 
    GAATGTTGTC CAATTAGTTC AAGTAGAAAG ATTATACAAA TAAACTCTGT 
    ACAGTTATCA GTTACTTCAC CTTACAAATT CAATAATAAT GAATTGTTTT 
    GTTGCTCTTC CTGATTTGTC TTACATTGAC TGGTTTGTTT ATATTTTTAT 
    TGCACCAACC ATTTTTTTCT GATAAAGTTA CTTATAGGGA ACTCTTAAAG 
    TAATTTCTTT ATATTATTAA ACTTGTTTGA TCTTGTAATT TTCAAGATCG 
    AATCTGTCAT CTACAAAAAA AAAACGGATC CCCCAAAGTA GGGTAAAAAA 
    AATGCCCTAA GGGTTCCAAC TATCCCTTTC CGAAGGTCTC TCCCTTGGAA 
    AACTAACTAG AACCTCCTCC TGCCTGCTAA TTTTCAGGGA AAAAAAAAAT 
    TTTTTTTTGG GGTAAGGAAA AAAATTTTTT TTTTTTTTGG GGCTTTTTTT 
    GGGGAAGTTT TTTTTCCCCC CGTTCAAAAA AAAAACCAAA AAGGGGGGGG 
    AAAAAAAAAA ATTTTCCCCG GATTTTTTTT TTTTTTTTTT TAAAAAAAAA 
    TTGTGGGGCC CCCCCTCCAA AAAAAAAAAA AAAAAAAATT TTTTGGTTAA 
    AAAAGTTTTT AGGGTTTTAA AAAAA

AT3G09070.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF740)
Computational Description
Protein of unknown function (DUF740); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT5G01170.1); Has 844 Blast hits to 758 proteins in 136 species: Archae - 0; Bacteria - 50; Metazoa - 319; Fungi - 62; Plants - 144; Viruses - 44; Other Eukaryotes - 225 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09080.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 14743 Blast hits to 9426 proteins in 454 species: Archae - 42; Bacteria - 3876; Metazoa - 4498; Fungi - 2945; Plants - 1499; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink).
Link
InterPro Scan - TAIR