Home
Mutant Lines
GT16179

GT16179

CSHL Arabidopsis genetrap mutant lines

Original: GT16179

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16179

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 28371234 [Map]; Strand: c
- AT1G75560.1 - [+] show detail - zinc knuckle (CCHC-type) family protein
  Distance: 0; Region: exon4 (3UTR)

ACTTTCTCCC TGATCAGGAT GGTTTTAGTT TTGGTTTGTT TTCGGAAAAT 
TTGAGACATT GCTTGTGTTG TATGAAGTAT TGAACAGATT AGTGTGATGC 
AGAGTTCTGA GTTTTCAGAA CTCAATATTA TATTAAAAAC AAATTTTAAT 
GGTTTGCTTT CTCCCAATCT CGAGCAATTT AAATGTGATG TACGTTTAGT 
TAGGTTTAAG GAGGACAATA TTGTAAGCAA TCCATTCACA GTCAAAACTC 
AATTTGTTAG CCGATCTCGA AATAAACTAA AAGACTTGTA AGTTACACAA 
AATTCGAAAA AGATAAATTC ATATTAAACG ATGGAAGTTT TAGTGGGAGG 
AACAAGAGAT GGTCCTGATC ATCTACAAGT AGATGAAATG AAATTGGATA 
ACGTAAAAGG AACAAATAAA CAACCGTACC AAATACTCCA TACAATACCA 
ACTTGCAGAT GTAATTATCT TAGAAACAAT GACATGTGAG GTTGTTTTTT 
TTTGGTTTTG GTTTTACACG GCATGCGAGT TTGTATCCAG TTTTTTAGTA 
ATTAAAAATG TGGAGAGACA ATGAGTATAA TAATTTGTAA ATGGACTAAA 
TTGTTTTACA CTCTTTCGAT TCGTTTTTTT AATATATATA CTCAATTACT 
CATATATTGG AAAAAAAGGA TAAAATATGT TAGTGGCATC ATTGCCTAAG 
TTTTCTTTT

AT1G75560.1

Model type: Protein coding
Short Description: zinc knuckle (CCHC-type) family protein
Computational Description: zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink).
Link: InterPro Scan - TAIR