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GT16187

CSHL Arabidopsis genetrap mutant lines

Original: GT16187

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16187

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26395169 [Map]; Strand: w
      • AT5G65990.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16187 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTGA 
    GGAGGCCCAA GAGCCATCCA GTCTTCTTGA AGGTGTACGG AAGTCCGAGC 
    ACGCCGGCGC CGACGATGGC GATGAAGACA TTTGCAAAGG TTTTTGGCTG 
    CGACGACAAT GTTCGAGGTC CCAAAAGAGG AGTGTCTTCC GTCGGCGGCA 
    GCGAATGGGA GGATGATCCC GAAGGCAGCG AATGGGAGGA CGATCCCGCT 
    TCCTGATCGT ACCTCATGCC GATCGAAATT GAGAGTGAAG AAGAGCCGAG 
    AGTCACAGTC TACGTTAATG GCGATCGATC TCTGATTGGG TGTGTTGTAT 
    ATGTTTGTGT GGTCAAATGA TATCTGTTTT ATCTTTTTCC CTTTTTTAAG 
    TCATTAAGAA AAAGATACAA AACTTTCATT GGCTCTTGTT TGGGGTTTCT 
    CAATTTAAGA AATAGTAGTA TTTGCTTAAG CAATAAACAA AACTCTGACA 
    TTTGACTCGT GTTACTTATG TGCTTAACCA AACTAAATTT TCTAATCAAC 
    TAATGAATGA GCTGTTGAAT TCGGAAATTA ATTAATCGAT CTTTGATACA 
    GTATATCAAA AAGCAGAACA ATAAACAAAA AACGGACAGG TAAGGAGGAG 
    AGGACAGGTG TGAAGAAATG TAGAAGTTTC AGAAATGATT GAAGAGGTTT 
    TAACCAATCG AAGCAAAGCA ACGTGGAGGA TGCATCGCAC GTCTCCCCTT 
    CTTCTGTGGC CAACTTGAAC ACGCCTCTCC AATTTTGGGC TCTCTCTTTC 
    TCTATGAGCC CAT

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16187 - 5-prime edge 
    TCCTACTTTA TGCCTGCTCC TCACACTCTT C

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16187 - 5-prime edge 
    CCTACTTTAT CCCTGCTCCT CACACTA

AT5G65990.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR