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GT16200

CSHL Arabidopsis genetrap mutant lines

Original: GT16200

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16200

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 852522 [Map]; Strand: w
      • AT2G02930.1 - [+] show detail - glutathione S-transferase F3
        Distance: -300; Region: promoter
    Flanking Genome Sequence: GT16200 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAAGTA 
    GGTGGAAGTT TGAGTCATTT GTCCTTTACT ACTAAGACTG GTTTAATATT 
    TTTTATCTGA TACATTGAAT GCTTTATTAA AAACTTTATC TCATAACAAG 
    TGTAAAAACA AATATTCAAA CGTTAATCAA TCCAATTTAG CTTTGAAAAA 
    TCCACCTAGA AGAAGACTAG TCAATATTGG TTGCGACGGT CTTGTAGAGG 
    CGTTATTATC TGTTAGATAA TATTACTATA AACAGTGAGG GATAAAGCAG 
    AAATGCTTCT GTATAAATAC TATCACTACT TTTGATCAAA ACAAAAAATA 
    CCATCACTAT TTTACTTGTG TGTTATTTCA TCACCTTCAC CTTCAACATC 
    AAACATCACA TCTCTTTCTC TTTTATCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 852576 [Map]; Strand: w
      • AT2G02930.1 - [+] show detail - glutathione S-transferase F3
        Distance: -354; Region: promoter
    Flanking Genome Sequence: GT16200 - 5-prime edge 
    ACTTTCTCCC TGCACCTACT AGCTTCATCT AGTAACTTTC TCCCTTTTGT 
    GATGACGGTT TTAAAGCTTT CTCTTGATGT GAAATTCGCA TCTTAACCAA 
    ACTAGAAAGG TGTGCAGTTT ATTCTTTTTA GTCAGATCTA TTGAATTGGT 
    TCAGACCGGA TCAATTCGGA TTATGCTGAT CAAGATTAAA ACATTTGGTT 
    AAGATAACCG AACCTAATTC AATAATGTCC AAATTGTTCT TTTGTCCGAA 
    GGCTAAGAAA ATGTTTTGGT ATTGTCCCAC ATCGCTAAAT AATTAATCGC 
    TCACTCTTGG AGTTGGTGTA TATAAAAGAA GCTTGATGGA CCAAACCATT 
    CATACCTTTC TCGGCCTTTT GGCTAAGATC AAGTGTAGTA TCTGTCTTCC 
    CCCCCCCCAC AACAACCNNA NNNGGGGGCC ATCGGCCCAC ACGATATTAA 
    CTCTATTTTT TAAGGGAGAA AGCCCGTTAA GATAGCTTGC TATCTGGGCT 
    TTCACGAGTC GCCAATGCGT TGCACTACTG CATGGGCCTG GCTCAACCCG 
    CCAATTTGAA AGCCCAATAT TGTTCTTTGT TTCATATTTT TATTTAATCA 
    TTGTTAAATA CTTACTTTGC GTCGATACTT ATCATTAACC ACTCTTTAGG 
    TGCCACGTGT GGAATATGTC CCTCCTCAAT CAAATTCAAA GGTGAAATTT 
    TTACACGGCG CCGTCTCCTT GATCTCGCCG TGGACCGTCG TCATTGATCA 
    CAATTTAGTG ATTCTCTTGG AGCGGTTTTA GATGATGAAT TGATTTGCTT 
    TTGTTATGTT TATGTGGGGC TTGTTCGTTT TGTGTTTA

AT2G02930.1

Model type
Protein coding
Short Description
glutathione S-transferase F3
Curator Summary
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase F3 (GSTF3); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: phloem, leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 13914 Blast hits to 13903 proteins in 1392 species: Archae - 0; Bacteria - 7907; Metazoa - 1739; Fungi - 775; Plants - 1190; Viruses - 0; Other Eukaryotes - 2303 (source: NCBI BLink).
Link
InterPro Scan - TAIR