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GT16226

CSHL Arabidopsis genetrap mutant lines

Original: GT16226

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16226

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2368145 [Map]; Strand: w
      • AT5G07480.1 - [+] show detail - KAR-UP oxidoreductase 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16226 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCTAC CGTTTTCATC CCTACTTAGG 
    ACGGTCCAGG TGATTCAGTT CATTAGATGC ACGTCAAGAA AAAAGACAAA 
    ATCTGCCGCT ATATTTTGTA GATGCAATGT ATAAGTATGA TCTAATCAGT 
    GACATGTAAT ACCTGTATCC GGGTGGATTC TCTGGCCAAA GATGAATCCA 
    ACGATGAAGA GGATGTGCAT AGTGCTTTAG AAAAATCCTC CAGAATTGGA 
    TCTTGTCCAA ACCGTCCTTG AGACTCGTAC TGTACCGAAC CGGTGCGTAG 
    ACATCGTTTG ACATAAACT

AT5G07480.1

Model type
Protein coding
Short Description
KAR-UP oxidoreductase 1
Computational Description
KAR-UP oxidoreductase 1 (KUOX1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR