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Mutant Lines
GT16264

GT16264

CSHL Arabidopsis genetrap mutant lines

Original: GT16264

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16264

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 17566885 [Map]; Strand: w
  - AT2G42120.1 - [+] show detail - DNA polymerase delta small subunit
    Distance: -853; Region: promoter
  - AT2G42120.2 - [+] show detail - DNA polymerase delta small subunit
    Distance: -853; Region: promoter
  - AT2G42130.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G42130.2 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G42130.4 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G42130.5 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon1 (CDS)
  - AT2G42130.3 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT16264 - 3-prime edge
```
AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
CTCTCATTAA CATCGATCCT TTGCATATTA GTTGTTTTCC CTGTAACTAA 
AGCCTCAAAG CCTCCAGCAT CCTTCAACTG TACATAGATG GATTCAGGAC 
AAAAATAGTT TGACAGTTCC AAACACACAG AGCTCTGTTC CTATACTAAG 
AAAAACTCAA TTGAGCTGAA ACATGATCAT TCAATTTCTG GACTTTGAGA 
AAAAAATTCT CTTTTGTTAT CTGCAAAATC TCGATTACAT CTAACAAATA 
CACAATTCAC CTAAAGTCTT CCCATTTATC CTCAGCTTAC GACAGAGATA 
GTAAAAGAGA CACAATTTCA AAATCAGAGT AAAATTGAAG ATCTAAACAA 
ATCATATATT CACATAACAA CCAAGTAATT CAAAGAGTTT ATAAAAGTGA 
GAGAAGTTAT ACAGCGAGAA GTAGCGATTC CTTAGCAGAA AGGCGCTCCA 
TTTCTCTGGC GTAAACCAAA GGAGATCCTT GAACTGTTTC CTGCACCATT 
GCTCTTAAAA CCCTTCTCCG GCACGAATTC TTCCAACCCT GCTTCACCAC 
CGGAACATTG AGACAAAATC TCGACGGTGA CGCTGAGGTT GAAAAAACCA 
ATCGAACCGC AGACGTACCA GGAACCGAAC CATGTATCAA CGCCATTGAA 
GAAGAAGAAG AAGAAGAAGG TGAAAAACGA AAGATTGAGA ATTTGTTTGC 
TTTGAG
```
5 prime edge [+] show sequence
1. Chromosome: 2; Position: 17566964 [Map]; Strand: w
  - AT2G42120.1 - [+] show detail - DNA polymerase delta small subunit
    Distance: -932; Region: promoter
  - AT2G42120.2 - [+] show detail - DNA polymerase delta small subunit
    Distance: -932; Region: promoter
  - AT2G42130.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G42130.2 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G42130.4 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G42130.5 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: intron1 (CDS)
  - AT2G42130.3 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: GT16264 - 5-prime edge
```
CGAGTCTAGA GCGGCTTAAT CCAACTCCGA GACCAACCAC GTAGGTCCTT 
CTTTAATCTT TTGGTTACAA TTTTTTGCTT CGGTTTTAGG ATAATTGTCT 
TTTAACTGGT TCCTATAGCT TTCCAGGTCT CCTTGTTTCG AAGGCAGGTG 
GAATTTTGAG TGGTTTGGAT CTGGAAGTCC TGGTTTACTC GCTGCTCGAG 
TTATATTCGA GTCTGTACTT ATCATTTTCT CATCTTAAAG CTCACCAAAC 
TTTATTCAAC GTTTTAAGTG TTTTGCCATC TGATTGTATT GTTTCAGGAG 
GTTTCCTTCA ACATTGGCGA ATTTATCAAG AATGGAGATA CTGATCAAGG 
ATGCTAACGC AAAGGCGACT GCAAATATCA AACTTTTGAA CTCGGTAACA 
CACTCAAACC CTTTTTCCAA AGTTTGATTA TTTGTTTACT CAGAATCACA 
AAGGAGGTTT CTCACAGTGG CAGAAAAATG CAGATAGAAA GCAAAATCAT 
TCTGTCATCA AAATTGACTG TTGAGGGACC ACTGAGATTG AAAGAAGAAT 
ATGTTGAAGG TATGCTTGAA ACTCCAACAG TCATTGAAGA AGCAGTTCCT 
GAACAGCTAA AAAGCGCTTT GGGACAAGCT GCCACAACGT TGCAGCAGCT 
TCCTGCTCTT ATCAAGGATA CTCTAGCCAG TGGTCTGAGA ATTCCCCTTA 
GAAGCTACTT TATCCATTTT TTATACATTT AACC
```

AT2G42120.1

Model type: Protein coding
Short Description: DNA polymerase delta small subunit
Computational Description: DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42120.2

Model type: Protein coding
Short Description: DNA polymerase delta small subunit
Computational Description: DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 81 Blast hits to 81 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.2

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.3

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.4

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 147 Blast hits to 147 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.5

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR