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Mutant Lines
GT16292

GT16292

CSHL Arabidopsis genetrap mutant lines

Original: GT16292

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16292

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 13385905 [Map]; Strand: c
- AT2G31390.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
  Distance: 0; Region: exon1 (CDS)

GTAGAGGTTT TTACCGACCG GTACCGACCG GTTTCATCCA TTCCCAGCCA 
ACAATATGAC CGAACTCGTC GTCTCCAAGT TTTCCGACCA AAGCAGATCG 
TCCACTTCGA CTAGAAACAA CGATTGCGAC GTTAGCGGGA GCACCACCTG 
GAGCTTTGAG GAATCCAGGA GCTTCGGCGA GTGAGACGCC TGATTCGGTA 
GGGACGAAAT CGATTAGCAT CTCGCCGAAG CTAACGATCA GTCCTTTATC 
ACCGTTGGAT GCCATTAGAT CAGAGATCTG TGAAATCGTT GGATCAAATC 
GGAGAATTGA GAAAAATATA GAGAGTAAGG AAGGACAAGG AGAAGAATAT 
ATAAAAATGA GAGGAAGGAG AAGAATGGTT TATATAGAGA ACAATGGGAC 
TGGTGTACAA GGCTTGCTAC TGATATATTA TTAACGTATT TTATTATAGG 
TTTACAAAAA AATCATAAAT CTACAAATAT ATCTTGTAAA AAAAACCATG 
AGTTTTTGTG TTTTTTTTAA TAAAATGAAA AAATCTTGTA ACGTTTTTCG 
ACCTTTGCCT GAGTATTTGA TTTGATCAGA AAAATAAAAT AAAAAAATCG 
TGTATGAATA TA

5 prime edge [+] show sequence

Chromosome: 1; Position: 3681657 [Map]; Strand: c
- AT1G11040.1 - [+] show detail - HSP40/DnaJ peptide-binding protein
  Distance: -733; Region: promoter
- AT1G11050.1 - [+] show detail - Protein kinase superfamily protein
  Distance: -231; Region: promoter

TTTTCTTTCT CCCTGCTTGT CCCCACCTGC AACTGCCACA CTAACGATGA 
ATGAAACATA TTCCATAGTG GCTACGTTTC ACTTTCGTTT TTAATGTTAA 
ATGTGGGAAA ATTGAAAAAG CAAAATTAAT AGATAGTACT AGGATTATAA 
AATTTTGACA AAATTAATGG GACAAAAATT TCAGACGGTA AGACAAAAGA 
GAAAACTGAA TAAAGGTCAA CTAGAGATAT CATTTTAAAC AGTCGACTAA 
ATTATCAAAT TAGACTCTTT ACGTGTAGAG TTGTTATTAT TGCTTGCTGA 
TGGAAATGGG GATCCACTAT TGCGGATAAA AATAACA

AT1G11040.1

Model type: Protein coding
Short Description: HSP40/DnaJ peptide-binding protein
Computational Description: HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11050.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G31390.1

Model type: Protein coding
Short Description: pfkB-like carbohydrate kinase family protein
Computational Description: pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 18509 Blast hits to 18503 proteins in 2397 species: Archae - 386; Bacteria - 14053; Metazoa - 143; Fungi - 116; Plants - 466; Viruses - 0; Other Eukaryotes - 3345 (source: NCBI BLink).
Link: InterPro Scan - TAIR