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GT16302

CSHL Arabidopsis genetrap mutant lines

Original: GT16302

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16302

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 144325 [Map]; Strand: c
      • AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16302 - 3-prime edge 
    ACGGTAGAGG TTTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACGGGC 
    AGGGGTTGTC GGGAAGGAAC GATCGGTGAA AGTAGTGTTA CTGTAATTGG 
    AAGATGTGGT TGCAGGAGAT CCGACGGTGT AGCTATGTCT CCGACGACTG 
    GGCATCGGAA AGTTCGTGGA GAACGTGTAG CAATGGTGAA CACGGAAGGA 
    AGGAAGAATC GGAGAGACTG ACTTTACAAT TTTTTCAACT TTTTCTTCTT 
    CGTTGAAAAA GACGACTGTT TTGGATATTT ATTGACGCCA GCTGTACAAC 
    TTGACGTTTC TCTAATTAAC AAAATTTAAA CCCGACAAGC TAAGATAATT 
    AATGTGTATA ATTTCCTTTT TTTATTACAT TTTGTCTAAT GATTTGTAAT 
    AAGCTTTTTT ATTCCTTAGA TTTAAATTCG ATAATTATTA ATTTTGAAAA 
    AAAACGATTG GTTTCAAATT TTATTGAATA ACTAAATACT TCGTATATAA 
    GAGTAGTTCT CGGCGTTCAG TTATCCATTC CGTTATCGAT TTTTTCGGTT 
    TTAAAGTTTA GTATCCATTC GGTTATTTGA AAGTTCTGTT CGGTTTCGAT 
    TTTAAAATTT AGTATTCATT TGGTTATTTT ATTTAAAATA TTTCGGTTAT 
    TTTGAATATT TTTAAATATT TTTACTATTT TATTTATATT TTCAAGTATT 
    TTTAGTTATT TAGTCTAGAA ATAATTAACA CTTTTGAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 144265 [Map]; Strand: c
      • AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16302 - 5-prime edge 
    CTTTCTCCCT GCCTGCCCGT ACTCCACCGA CACAACCACC TCCATCGCTC 
    GTCGCATCTC CGGTATCTTC ATCAACTGCT TCACTCCTCC CGATTCCGTT 
    TCCTCCAAAT ACATCGACAA TTCAAAGTCC TCTTCCGGTA TAGTTTGATC 
    AGTAATTCTT AGATTTTAGA CTTTTAGTGG AAACAGTTGA TGATGATTTT 
    ATTTGGTCTC TGTGTGAGCA GACAATAATA TCCGTAGTAG ACGTAGCTCA 
    ACAGGAAGTA GTAGTGTACA GAGGAGTTAT GGAAATGCAA ACGCAACAGA 
    GCATACAAGA TTCACTTTCG ATGAAATCTA CGACGCTACT AAGAACTTCT 
    CTCCGTCCTT TAGGATCGGA CAAGGCGGTT TTGGCACTGT TTACAAGGTC 
    AAACTCCGAG ATGGCAAAAC CTTTGCTGTA AAACGTGCCA AAAAGGTTTG 
    AATATTCCTT TCTAAGTCCT GTCTTAATGG AGATTGTCGC TATAACATTG 
    TAACTAACTT GATGCAGAGT ATGCATGACG ACCGTCAAGG TGCAGATGCA 
    GAGTTTATGA GTGAGATTCA GACATTAGCT CAAGTTACTC ATTTGAGTTT 
    GGTTAAATAC TATGGATTTG TTGTTCACAA CGACGAGAAG ATTCTCGTTG 
    TGGAGTATGT ACCCAATGGA ACTCTTAGAG ATCACTTGGA TTGTGAGTAC 
    ACATCCTACT ACTATCTTCT TT

AT4G00330.1

Model type
Protein coding
Short Description
calmodulin-binding receptor-like cytoplasmic kinase 2
Curator Summary
high overall homology to CRCK1
Computational Description
calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR