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Mutant Lines
GT16313

GT16313

CSHL Arabidopsis genetrap mutant lines

Original: GT16313

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16313

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 19555149 [Map]; Strand: w
- AT2G47700.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -565; Region: promoter
- AT2G47710.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
  Distance: 0; Region: intron3 (CDS)

ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
CTTATGATCA ATCTTTCAAC TATACACCCA TTCTGATTCA CTTGTCGGTT 
TGTGTGGCAG GGCGGTTCTC GGGAGTACGA GTGACTACTG CGCTCATCAT 
GCTCATTGCT CGGTGATGAT CGTGAAGAAG CCTAAGATCA AGGTCTGAAA 
CCTAAGGGAA GGCTACTCGG TCAAAGCAAA GTCTCTGCAT AGTCTTCTAA 
TTCAGAAGAA TAAAGTGAAA TAATATTAGC TTGATGTGTA ATTGTTTACT 
ACATACAATG TTTTGGTATC CTTAGACAAT CAATATTCGT GTGTTATAAT 
ATGCTAATCT TTCTCATAAC AAAATGGATG TGAAAGTTAT AATAAACTTC 
ATCTTCACTC GACCAAGAGA AGAAAACAAA TCAACTAAAT AGAGATTAAT 
GATTTAAATG AACAAATTTA TAGTTTGGTT GTTGGTTCAG ATGGATGGAT 
GGTTTGATGA TCATCTATCC AAAACTAAAG TAATAAAATA ATAATAAAAA 
ATTATCCACA ATGGGAGAGG AAAGAAAAGA AAAGGGAGAG TCCAATGTCA 
TTGTCCGGTT TTGAACCACG TCATCTCTAA CAGGTCGGAC GAGAGAGAGA 
GAGAGAGAGA GAGAGAGGAA

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT16313 - 5-prime edge
```
GGCTTCCACA ACAAGATAGA AGCATGATGC TTATCTAC
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 19555263 [Map]; Strand: w
- AT2G47700.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -679; Region: promoter
- AT2G47710.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
  Distance: 0; Region: exon3 (CDS)

CCTATTAGGC TGAATGAATA ATACCTCTTG ATAGCTCCAT ATCCATGGCT 
TCCCACAACA AGAATAGAAG CATGATGCTT ATCTACAACT TCACATAGGA 
TATTCCTTGC ATCACCTTCG AAAACTTCGA TCACCGCACC ATGAACCTAC 
ACAACAAACC TAGGAATGAT GATTGAAAAG AAGAAGATTG TTGCTAACCA 
AAGATAGATA GTTGCTATAA GAAAAACCAG TGCTACTTAG CTTGAAGCTC 
TTAAATGTGC TAGAGATTCA CATTCACATT TTTACCAAAC TCATCTAATA 
TAGTCCAATA CAACACATGA TGATGATTAT AAAATCCAAG AAACACATAA 
AAGGAATTTG AATGTTTGAT AATAGCAAGA TCGTACCGAT CTGCTCTGAC 
AAATTGCTTT GGCTTTCTCG ACAACCTTAG CAGCGGTATG ATTCAGATCA 
GCATCAACAT AAGGTACAAC CTCC

AT2G47700.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RED AND FAR-RED INSENSITIVE 2 (RFI2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05545.1); Has 457 Blast hits to 456 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 17; Plants - 198; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47710.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link: InterPro Scan - TAIR