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GT16315

CSHL Arabidopsis genetrap mutant lines

Original: GT16315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16315

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 369642 [Map]; Strand: w
      • AT3G02100.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16315 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACACAGGA AGGTCATATT 
    CACTGTGAAA GAAAGTGGTT ACACTATACT TTTTCGCGGG AAGATATGAT
    AGTTTAAAAT GGGCTTCTAT GGATTCTCTC TTTGGCCCAA TATATAGAAA
    ATCAAATGGC CCATTAATCT TGAACGCTGG AAAATGGAAA TACACTCTTT
    TTCACCTCAC TCGACCAGGT TCGGTTATAT ATGTTGCCTT TGGGAGTTTT
    GGGGTCATGG GCAACCCTCA GTTAGAAGAG CTAGCAATTG GTCTAGAGCT
    TACCAAGAGG TAATGATTTG GACATAACCG GGTTTGTGTG TTCCGGATTA
    TCCTACTTAC TCTATGCGTG TCTATTATCT AATAAGTTAT GTTGATCCAT
    TCACCAGGCC AGTTTTGTGG GTCACTGGTG ATCAACAACC AATCAAACTT
    GGGTCGGATC GAGTCAAAGT GGTGAGATGG GCTCCACAAC GGGAGGTCCT
    TTCTTCTGGA GCCATTGGGT GTTTTGTGAG CCATTGTGGA TGGAATTCAA
    CTCTGGAAGG AGCCCAAAAT GGCATACCAT TTCTATGCAT CCCTTATTTT
    GCAGACCAAT TTATCAACAA AGCATATATA TGCGATGTGT GGAAGATTGG
    ATTAGGACTT GAAAG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17251884 [Map]; Strand: w
      • AT2G41380.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -57; Region: promoter
    Flanking Genome Sequence: GT16315 - 5-prime edge
    CTTTCTCCCT GTTCCCGTGA TAGTCACTCT TTTGGATTCC ATTCACCACC 
    TTTGATCAAT TCAAGTTTGA CACGCTTCTC TCGAATCCTT CTAACATATA
    ATAGATCCAT CGGATCCTCC AAAACCACAA GTTAAAAAAA TTATTCAAGA
    AACACGAGAA CAAAAACAAT GGCGAAATTA TTCATCAAGC AAGCAGAGCA
    ATATGCAGCA GCCCGACCCA GTTACCCCAC CAAACTCTTC GAATATATCG
    CATCGAAAAC ACCGTGCCAC AACCTTGCCT GGGACGTTGG CGCCGGAAGC
    GGCCAAGCCT CACGATCGGT ATAATAGTGT TGTTCAAATC TCCAAATAAC
    TCATGTTAGT CTTTCAATCT TGATTCAAAA TTCTATATCA TTTTAATCTT
    GTCCT

AT2G41380.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G02100.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR