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GT16320

CSHL Arabidopsis genetrap mutant lines

Original: GT16320

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16320

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104095 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16320 - 3-prime edge
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCCAG 
    TAGTAGAGAC CACCGGAGGT AGGGGAAGAG GAGCAGATCT CG
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104092 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16320 - 3-prime edge
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTC 
    CAGTAGTAGA GACCACCGGA GGTAGGGGAA GAGGAGCAGA TCTCGGGCGT
    ATATGTTG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104034 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16320 - 5-prime edge
    CTTTCTCCCT GTACTGGAGT GCTATGCTCG CTGGCCCTCG TTGGGCTCCT 
    CTTGCCTCTT GGATGACTGG CTGGTACTCC CTTCTCTCAC CTTTTTCTTA
    ATTTGGAATT GGAAGCAAGA GAGCGTCTCT CTCTGACTCA TTTTCACAAA
    TCTTTTTTCA GGTTCAACAT CGTTGGTCAG GTGCAACATT CATTCAAGCA
    GACTTGTTTT CATTAGATAT ATCTCTCATT GGGGCTAAAA GTAAGGTTGT
    GGTGTGTTTG CAGTGGGCAG TGACGGCCAG CGTTGACTTC TCTCTGGCAC
    AGTTGATTCA GGTGATCGTC CTTCTCTCCA CCGGCGGTAG AAACGGCGGC
    GGTTATAAAG GATCAGACTT TGTTGTGATT GGTATCCATG GTGGGATCCT
    CTTCATCCAC GCTCTTCTCA ACAGCCTCCC CATCTCCGTC TTGTCTTTCA
    TTGGACAGCT TGCTGCTCTT TGGAATCTCC TCGGTACCCA ATCTCTCTTT
    TGTCTCTGT

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR