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GT16334

CSHL Arabidopsis genetrap mutant lines

Original: GT16334

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16334

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26192825 [Map]; Strand: w
      • AT1G69630.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16334 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTGGA TCAACACTAT 
    CGTCACGCGT AAAGTTCAAC ATATCGATGT TTTGGATGAT TCGTATGGGG
    GTTGGGAGGT TCAGTTACCT TCAAGCATTT ACACTTGTGA GAGTTTGGTA
    TCTTTAAAGC TTTGTGGATT AACTTTGGCT AGTCCCGAGT TTGTTTCTTT
    ACCTTCACTC AAAGTTATGG ATCTGATTAT AACTAAGTTT GCTGACGATA
    TGGGGTTAGA AACGCTTATT ACGAAATGCC CGGTTCTTGA AAGCTTGACT
    ATTGAGAGGT CTTTTTGTGA TGAGATTGAA GTTTTACGTG TGCGGTCTGA
    GTCTCTGTTG AGGTTCACTC ATGTTGCGGA TAGTGATGAG GGTGTGGTTG
    AAGATCTTGT TGTTTCAATT GATGCTCCCA AGCTTGAGTA TTTGAGGCTA
    AGTGATCATC GAGTTGCAAG TTTTATACTT AATAAACCCG GTAAGCTTGT
    CAAAGCGGAT ATCGATGTTG TGTTTAACTT GAGTTCCGAG AATAAGTTTA
    ATCCAGATGA TCTACCAAAG AGAACTATGA TACGTAATTT TCTCGTCGGG
    ATCTCTATTA TTAAAGATAT GATCATTTAT TCGAGTACTC TTGAGGTACA
    CTACAATGTG GAATTTGCTA TTTGATTGAA TGTGTTAGCT CTATTCTTTC
    CCTGATACTT TTTATTTTCC TTACAGGGTA TCTATGATTT CTCAAGATGT
    GAACGACTAC CCTTATT

AT1G69630.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G78750.1); Has 2345 Blast hits to 2298 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR