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Mutant Lines
GT16351

GT16351

CSHL Arabidopsis genetrap mutant lines

Original: GT16351

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16351

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 94539 [Map]; Strand: w
- AT4G00230.1 - [+] show detail - xylem serine peptidase 1
  Distance: 0; Region: intron3 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGCATG 
GATGGGAGTT ATATGAATCT CACTAGCTAG TGCTTTGTTT TGGGAAAAAT 
ATCAAAAACA AATAATGTTA CGTACCCATC ATCTTCTTAG CTTCATGTGG 
AGAAAGCTTG GCAGCAAAAG CGTTGAAGGC TTTAGTGTAA CTATATACTT 
TTCTTTCCTT TGCTTCTTCT TGGCTGTTTT CTCAAGAGAC GTTATAAATT 
TGATTAGCAA ACAACCAAGT AGAACATTAC TCCATAAAAC GTTACGCGTT 
TATATGTTTT AGAGTATGTG TTATACATTG ATGCATGACA TGTACCTGAT 
ATTCAAAGAT GAGAGAAGAT TGATGTGTGT CTTGATAGTT TCTTCTGTAT 
TATCCGGTCG ATCTCCCAAA TATATAATAT AGAAATCCTT TATAATTAAG 
AATTTCAAGA GTAAAAATAT ATTCTCCTTG CAACATAAAG TTTTGTTCAA 
TCTGATGACA AACAAGCTGG AGAAACAAAG ATTGTGTATT ATCATTACCT 
TTGCATG

5 prime edge [+] show sequence

Chromosome: 4; Position: 94590 [Map]; Strand: w
- AT4G00230.1 - [+] show detail - xylem serine peptidase 1
  Distance: 0; Region: exon4 (CDS)

TTCCATCCTA CTTTCTCCCT AATCCTGCAC TGGTGCAGAG ATGGAAGAAG 
TTGTTAGTGT ATCCCGAAAT CAATATCGTA AACTTCACAC GACAAAATCT 
TGGGATTTTG TTGGACTTCC TTTGACAGCA AAAAGACATC TAAAAGCAGA 
GAGAGATGTT ATTATTGGTG TTCTTGATAC AGGTTTATTT TTTTCTATAT 
GCAAATTGAT TCGATATTAT TCATTTATGC TTCTTATAAT TTATCTAAAC 
CTTCCTATAA TACAACAATC AGGAATAACG CCAGACTCAG AGAGTTTCCT 
AGACCATGGT CTAGGACCTC CTCCGGCTAA ATGGAAAGGA TCTTGTGGAC 
CTTATAAAAA TTTCACCGGA TGCAACAAGT ATACAATTTA TCTCTTACCA 
TTTTCTACTT TAATCGATTT TAAATACAAA CTTTGATCAC TAGAGAATCT 
TGATCTCTAA GCAACATGAA CTCTTGAGCA ATTGTTAAAG AAAATGTCAT 
TGCTAGAAAA ACAAATAAGG AGTTAGTTGA TGAAT

AT4G00230.1

Model type: Protein coding
Short Description: xylem serine peptidase 1
Computational Description: xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link: InterPro Scan - TAIR