1. Home
  2. Mutant Lines
  3. GT16422

GT16422

CSHL Arabidopsis genetrap mutant lines

Original: GT16422

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16422

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8460034 [Map]; Strand: c
      • AT4G14743.1 - [+] show detail - pseudogene, hypothetical protein, similar to putative reverse transcriptase
        Distance: -1279; Region: intergenic
      • AT4G14746.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits...
        Distance: 2580; Region: intergenic
    Flanking Genome Sequence: GT16422 - 3-prime edge 
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GGTGTGAGTC GAAATATTGC GAACGGTGAA ATATATTATC CGTTCGAGTA 
    TAAAATAAGT TTTGTTCATG TTATTCTCAC TCGACCACTT TAAAACGACT 
    TCTCCTTCCA CTGAGCATTT TTATCATAAT TTTCTCTTAT TGAAGAAAGA 
    GTTTTAGTTT TAGTGTTTTT GGTTTTTATA TTGGCGTCCA TTACCAATTC 
    TGAAGGATAA AAACAGTTCC TTCAGGTATA ATGGCTTGTG ACGCTATATT 
    GGTTGTGGTA TATCCTGATC TTTTTGCTTT TTTCCATGCC TTTTGATCCT 
    GGAAATGCCT CGCACATTAT ATCAATTGGT TTTACTTTTA TCTGATGCTG 
    GTAATTACTT TATTCTAATG ACAGCCAACT ATGCTACATA CATGCATCTC 
    TTTCTGTCAA AATTGTTACA TTGTTCATTT ATATTATATG ATAGTGTTAT 
    CTCGGTGGGC AGAGGGAAGT TGGTTGCGTT AGCTTCTCTA GTATATCCGT 
    TTCACAGTTT TTCCTCTGTT GAATTCTTGC ACTAGCTTTC ATATGGGCCA 
    TATTAAGTTA CATGTGGGTG GGTGCCGTAA CAGTGCAG

AT4G14743.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein, similar to putative reverse transcriptase
Link
InterPro Scan - TAIR

AT4G14746.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR