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GT16428

CSHL Arabidopsis genetrap mutant lines

Original: GT16428

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16428

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 105165 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16428 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATC 
    TCTCACTCAC TCTTCTTCAT CATACCGAAA AAAATCCAAT GGCTTCTTTG 
    GAAAATCCAG CAATCGATTC TTCAAGCGAA TTTGAGAGTT CTTCTGAAGA 
    GATCTCTTCT TCTAAAGAAA GCAAACCCAA AGAAGCTCCC GTCACTGTTC 
    CGTCAACAAA AACCCTAAAC TCTCCTTCCG CCGCCGTGGC AGTTTCTGAT 
    GACTCAGAGT CAGAGAAGCA GTCATTCGTC TTAACCAGGC GGAAGAAGAA 
    AGAAGGTGCT GCTGAATCAC CGGCAGTGAA GTCAGGGAAG AAAGAAGGTG 
    CTGCTGAATC ACCGGCAGTG AAGTCAGGGA ATAACGAAGG TGCTACTGAA 
    TCACCGGCGG TGAAGTCAGG GAAGAAGCGA GCTAGCGAAG GAACCACGTC 
    AAGGGACATG CATGTCAAAA GAATTAAGAA AGAGGGCGAT AACAAAAAGG 
    GGCATGCTCA GAGAGTATGG AGTGAAGAAG ACGAGATCTC TCTCCTGCAA 
    GCAATGATCG ATTTCAAAGC TGAGACAGGT ACAAGTCCTT GGGATCATAA 
    GGATAGGTTT TTTGATATCG CCAAGAAATC TATAAGCTTT GATGTTAGTA 
    AAGTCCAGTT CTTTGACAAG ATTAGAAGCT TTAAGAGAAA GTATTTTGGT 
    GACCGGAAGG TGAGAAGTGT TGAATCGGAT CATGATAAGA AGTGTTTGGG 
    GTTGGCTGTT TCTTTTTGGG GATCTGATGG TGTGAGCCTT GAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 105218 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -1; Region: promoter
    Flanking Genome Sequence: GT16428 - 5-prime edge 
    CCTACTTTCT CCCTGGTGAG AGAGTTACTT TTTTTAGGGT TAGTGAGCGG 
    CGAGACTTTT TTTCCTTTAA CGCTGAACAT TCTTCACTCT CTTTTATATT 
    TAACAAACAA TCTAATTAAA CAAAGCCCAA CAACAAATTA AGGTTGTTCG 
    AATGTTGTCT GCTAAGAGTT TTGGTGGGCT TGATAGGGAC AAGGTATTGA 
    CTTTAGACTA AGTATCATCG GTTGGTCTTG TCTAGTGTTC TCCAT

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR