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GT16436

CSHL Arabidopsis genetrap mutant lines

Original: GT16436

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16436

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 471463 [Map]; Strand: w
      • AT2G02000.1 - [+] show detail - glutamate decarboxylase 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16436 - 5-prime edge 
    TGTTAACGCA TCGATTCTGA AGGTCGGTGG TAACAGGGTA TTGGTCCATC 
    TCAACGTTGT TCTTGTTGAT GGATTCCATC ATGAGCTTGT CACATTCTGG 
    CTCCATCCAA GTGGTCACAA AGGAGGCCAG GTTTAGCCTC GGGTTACCGT 
    CAAACTTGAG CTCGTCGTTG ATGATTTGGT ATGCTGCTTC CTTAGGGATC 
    GAGTTCTTAG GTATTTCGAA TCTGATGAAA AATTGATATA TTTAGCTTAA 
    GATTAAAAAA GAAAATACCT CTTATATAGT AACACACATT ATGCTCGGAT 
    CTTTCAGTGC AAGTGGTTAA TTTCGTTAGA ATCTAGTATT CTTTCTTATG 
    TACCCAAAAA TTAAAATCTG GAACTATATC GTATATTAAA AATAAATATT 
    TCTGTAATAA ATATTGAATC TAGAATCAAG ATGCTGTGTA TCGTCGTCTA 
    GGCTAAGTTT TAGAACTCTA GTTACCAATG AAAACATTAA ACAAAATAAA 
    ATTGTGTTTC AACTTCTTAC CGTGAGATAG AGTTGCGGAC ATAACGGGAA 
    GCAAAAGTTG AATGGATTGA ATCATCGGAT TTGGAAGCTG TCTTAGATAA 
    AACCATCTTC TTGAAATGAG CTAAAGAAAA GTAAGGGGAA AAATGTGCAA 
    TGTTTTTGTT TTGTAGTTGA GTAATATGTG AAAT

AT2G02000.1

Model type
Protein coding
Short Description
glutamate decarboxylase 3
Computational Description
glutamate decarboxylase 3 (GAD3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2817 Blast hits to 2814 proteins in 863 species: Archae - 192; Bacteria - 1666; Metazoa - 146; Fungi - 354; Plants - 282; Viruses - 7; Other Eukaryotes - 170 (source: NCBI BLink).
Link
InterPro Scan - TAIR