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Mutant Lines
GT16450

GT16450

CSHL Arabidopsis genetrap mutant lines

Original: GT16450

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16450

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 114827 [Map]; Strand: c
  - AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
    Distance: -861; Region: promoter
  - AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
    Distance: -144; Region: promoter
Flanking Genome Sequence: GT16450 - 3-prime edge
```
AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
CTGGAGGATA TGAGTGGGAC TCTCATAATT TCAACGGCAC CGATAAACTG 
ACATCTTCAA GTTGGAGTTT ATTACACTCG TTCCTTCAAG AAACTGTACC 
GTCGACTTTC AGATTAGCCA TTTAGGACTT CTCAAGATTT TGAAAATGGC 
GCATCAACAT TTCTTCAAGC CTCTTCTTCC TGGCTTCCAC GCCTCCTTGG 
TA
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 460524 [Map]; Strand: c
- AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
  Distance: -7; Region: promoter

CTTTCTCCCT GAAGCACGAT GGAGTTGGTC TTGGTTTGCT TAGTCCTGCG 
ATGGTTATCC ATGTCAGACA GCACGGTATT ACAAAGAAGA AGAAGAAAGA 
AACTAAGAGA GAGTGGTCGT ATTTTGAAGG TTGCACACGA ACCATCATTT 
CTATTTATAG CAACTAACCA AATCAAGTAA CCAACGGTCC AACGGGTTTG 
GTCGGTTTCT ATGTTAATTT ACTCAATTGG TTTTGTTCTC ATTAATTAAA 
TTAATTAATT GTTATTGCAA GTTGCAAGTT TGCAACCAAT AAAAACCACA 
AGTACCCGTG ACTTCATTTA CTCCGTTGTG ATGGCTTGGA CTGGAACATA 
AGTTGTATAA ATATTGATAC ATGCCGTTAA TTAAGATCAT TAATAATCAA 
CAACAATTGT TTTCAAAGCT TTTCTGATTG CTATTCCAGT TCATTCAATC 
AGAAATTATA CTCCCTTTGT TCATAATAGA TTGAAATTTT GGATATATTA 
AGACAAAATC ATTTTTAATT ATTTTAACAT TACTTTTTGT ATCAAACATT 
TTTCAATGCC TAAGAAAAAC TTACAAAACT ATTGTCCTCG TGTACGTTTG 
TAAACACAT

AT4G00250.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00260.1

Model type: Protein coding
Short Description: Transcriptional factor B3 family protein
Computational Description: maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.1

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.2

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.3

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR