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GT16457

CSHL Arabidopsis genetrap mutant lines

Original: GT16457

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16457

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2220784 [Map]; Strand: w
      • AT4G04450.1 - [+] show detail - WRKY family transcription factor
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT16457 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTGC 
    AGAGGCTGAG ATAGTAGCCA TGCTTGAGGA ACACGGTAAT ATGGTTCGAG 
    CCAAGAGATT TGTTGGGTTC ATTAAACCGT CTTGGTTCGA CATGGTGGAG 
    CCTGAGAGAA GCATGCTTGC GGCTGCTGTT GTAGTTGAAG CCATGTTCAT 
    AGCCGCAGGA GGTAATGGAT GGTTATGGTT TCCTTCGTAG GTTGTTATGA 
    GAATGGTTCT GTCCTCCGCG CAACGTTGCA CCTGTTAGGT CATCATCATT 
    AATTAGTTAG AATACATTAA TCAACATATT TGTACACTTT TGATCTCCTT 
    ACTACAAGAA ATTAATTTTA TTGATACATA ATATTTCGTC ACTATGCCAA 
    CAAATGTGTG AAATGTTTAG AAATATATGT TTAGCTAACG TACTTGCTTG 
    CGAACGGGGC ATCCAACAGC CATTGTGCAA CGGTAATAAG CTCGAGGGCA 
    CGGGTTTCCT TTCGCCATTT TTTGTCCGTA TTTTCTCCAT TGACATCCAA 
    TCGCTTAACT GTAAAACAAT GTCATTGATG TTAATGAACC TCCAAAAACA 
    TTTGTAGAGA TCAATCTTCA TAGAAATTCT AGAGAGGAAG ATGAATTAGT 
    ATTACCATGG GGAGCTTCGG ATCGAGCACG AACCGAGACA CGGGCTTTAC 
    GCATGGTGGC TTCGGCGGCC GCTTGCTCAA TGACCTTGCT ACTTGCATTT 
    TCACTGCCAT TGCCACCGCA AATGCTGGAT GATGCATGGT GTTTAGGAAC 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2220862 [Map]; Strand: w
      • AT4G04450.1 - [+] show detail - WRKY family transcription factor
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT16457 - 5-prime edge 
    ACTCTCCAAC CATTAACCCG TTGATGCTCT TCTCTCAACG CGATGGTTTG 
    GTGGAGTTGA ACCAATCGGT TTTGCCTCAT ATGATGGGTC AGGCTTTGTA 
    CTACAACCAA CAGTCTAAGT TTTCGGGTTT ACATATGCCG TCTCAGCCGC 
    TAAACGCTGG TGAGAGTGTT AGCGCCGCTA CTGCCGCAAT CGCCTCCAAT 
    CCCAACTTTG CCGCGGCTCT AGCTGCAGCC ATAACTTCTA TTATCAACGG 
    TTCGAACAAT CAGCAGAATG GGAACAACAA TAACAGTAAT GTTACAACGA 
    GCAACGTTGA CAATAGGCAA TAACATTTTT TTATAAGTTT TAGTTAGGGA 
    CTTTTTATCG GTCGATTTTG TTTTTTTTTG GGTTTTTTGC ATTATTCTTT 
    AGTTACGGCT TTTTTTGTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2220909 [Map]; Strand: w
      • AT4G04450.1 - [+] show detail - WRKY family transcription factor
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT16457 - 5-prime edge 
    TTGGTGGAGT TGAACCAATC GGTTTTGCCT CATATGATGG GTCAGGCTTT 
    GTACTACAAC CAACAGTCTA AGTTTTCGGG TTTACATATG CCGTCTCAGC 
    CGCTAAACGC TGGTGAGAGT GTTAGCGCCG CTACTGCCGC AATCGCCTCC 
    AATCCCAACT TTGCCGCGGC TCTAGCTGCA GCCATAACTT CTATTATCAA 
    CGGTTCGAAC AATCAGCAGA ATGGGAACAA CAATAACAGT AATGTTACAA 
    CGAGCAACGT TGACAATAGG CAATAACATT TTTTTATAAG TTTTAGTTAG 
    GGACTTTTAT TCGGTCGATT ATGTTTTTTT TTGGGTTTTT TGCATTATTC 
    TTTAGTTACG GCTTTTTTTG TTTATT

AT4G04450.1

Model type
Protein coding
Short Description
WRKY family transcription factor
Curator Summary
member of WRKY Transcription Factor; Group II-b
Computational Description
WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR