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Mutant Lines
GT16460

GT16460

CSHL Arabidopsis genetrap mutant lines

Original: GT16460

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16460

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 2220630 [Map]; Strand: w
  - AT4G04450.1 - [+] show detail - WRKY family transcription factor
    Distance: 0; Region: exon6 (CDS)
Flanking Genome Sequence: GT16460 - 3-prime edge
```
TTGTTGGGTT CATTAGACCG ACTATGGTTC GACATGGTGG AGCCTGAGAG 
AAGCATGCTT GCGGCTGCTG TT
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 15903364 [Map]; Strand: w
- AT5G39740.1 - [+] show detail - ribosomal protein L5 B
  Distance: 0; Region: exon1 (5UTR)
- AT5G39740.2 - [+] show detail - ribosomal protein L5 B
  Distance: 0; Region: exon1 (5UTR)

CTTTCTCCCT TGATCTCGCA TTAGGTCTTT GCGCCTCTTG CCATCTTTTG 
TCACTCATCT TCACAGGAAA CAATGGTAAG CCCTAGCTAA GATCTCTCTT 
TACTCCATAG TTTCTTCTTG ATTTTCTCCT CAGGCTTCAG ATTTTGGGTT 
TCGTTTCATG TAGAAATCTT CTGCATTTCA GTTTGATAGT TATGGTAACG 
AGAATTTCAT GAACATATGG TTCTATTCAG CTTCGTAGAT GTTTTTCTTC 
ATGGGTTTTG GTTACGACTT GCTTGAGAAT CGAAAGTAGC ATATTTGTGT 
TTTTTGTTCT TGGGATTTAG AATAAAGTTT AAGACTTTAG ATCACTGATG 
CGTTTAAAGT TTGAGACTTT AGCTTTTTGT TCTGTGGTTG AGGTCACTGG 
TGCGTTTAAA TGTATGATCT TTCGTTCGTT ACTTTGAAAA AAATATGGTT 
AGATCTTTAG ATTTATTCCT TTGTATATGT TGGTAGGTGT TTTGTGAAGT 
CCTCCAAATC GAATGCTTAC

AT4G04450.1

Model type: Protein coding
Short Description: WRKY family transcription factor
Curator Summary: member of WRKY Transcription Factor; Group II-b
Computational Description: WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G39740.1

Model type: Protein coding
Short Description: ribosomal protein L5 B
Curator Summary: Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.
Computational Description: ribosomal protein L5 B (RPL5B); FUNCTIONS IN: structural constituent of ribosome, 5S rRNA binding; INVOLVED IN: cell proliferation, translation, ribosome biogenesis, leaf morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 (TAIR:AT3G25520.1); Has 1454 Blast hits to 1453 proteins in 545 species: Archae - 345; Bacteria - 5; Metazoa - 622; Fungi - 159; Plants - 121; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G39740.2

Model type: Protein coding
Short Description: ribosomal protein L5 B
Curator Summary: Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.
Computational Description: ribosomal protein L5 B (RPL5B); FUNCTIONS IN: structural constituent of ribosome, 5S rRNA binding; INVOLVED IN: cell proliferation, translation, ribosome biogenesis, leaf morphogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 (TAIR:AT3G25520.1).
Link: InterPro Scan - TAIR