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Mutant Lines
GT16471

GT16471

CSHL Arabidopsis genetrap mutant lines

Original: GT16471

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16471

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 2584087 [Map]; Strand: c
- AT1G08220.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-t...
  Distance: -764; Region: promoter
- AT1G08220.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-t...
  Distance: -766; Region: promoter
- AT1G08230.2 - [+] show detail - Transmembrane amino acid transporter family protein
  Distance: 0; Region: exon6 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
TGTAGGTATA CCTGCATAAC TCAAAATTAG TAACAATGTA TATATGTGAC 
GAAAATAAAA TAAAATAATA ACAATGTATA TATGTGAAAG AAAAACGTTA 
AAAAAAAATT GTATTTACCA CAGCAACGGC CGAAAGTTGA AGGACGGTGA 
AGAGATTGAC GAGAAAAATA AACCAAGTAG GGACAAAGTA ATGGTTTGTC 
TCGGCATTTA AGAAATTGGT GAAGATAAGT CCATTGGCTT TATTACCGAA 
TGCCCAATAT CCTGTGATGG CTACTGTGAA AAATGTCATT ATTACTACAA 
GGTAACACAT ACACAACCCT TTCATCATTT TTCTCTTCCC CCTTCGACCA 
GANNNNGNTG CCTGCGTTGC AAGAAGATAG TATTCATATA TCAAATACTC 
TATATATATA ACTGTAGTCG ATCATGTGAC TGCCCTTTTG TTTTTGATGA 
ATAAATATTA AAGTGGTGTT CTAAACAAAG AATGGAAACA AAATGAAACC 
TGAATTTCAG GTATAATGCC ATTGCCGTAT GTAGTGGCAA TAATAGCCAT 
AGCATTAAAG ATTCCAAACA CTCTAGTTTC TTTATCACCA ACTATAGTAT

AT1G08220.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08220.2

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 152 Blast hits to 152 proteins in 76 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 92; Plants - 30; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08230.2

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Computational Description: Transmembrane amino acid transporter family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G41800.1); Has 2686 Blast hits to 2681 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 558; Fungi - 296; Plants - 1464; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink).
Link: InterPro Scan - TAIR