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GT16488

CSHL Arabidopsis genetrap mutant lines

Original: GT16488

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16488

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8552511 [Map]; Strand: w
      • AT2G19810.1 - [+] show detail - CCCH-type zinc finger family protein
        Distance: 653; Region: intergenic
      • AT2G19820.1 - [+] show detail - LOB domain-containing protein 9
        Distance: 1032; Region: intergenic
    Flanking Genome Sequence: GT16488 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGAAGTAT 
    CCCATTCTTT AACCAAAAAA TACGACATTC ATTTTCAATT ATTCCGATCC 
    ACAAAGTTAT TAAACGTTCA TTAGCATATA CTAGTTGTTT TCTAATGTAT 
    GTTTCAATAC AATCAAACAA GAAGGTGATT CAAAAACTAA AGCAGACATG 
    TTGGAAAACT TTATACTATT ATAGTTTATT ATAGCTAAAA AAAACACATT 
    GCAATAATTT TAATCAGATC CAACATCCAA TTATATCAC

AT2G19810.1

Model type
Protein coding
Short Description
CCCH-type zinc finger family protein
Computational Description
CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G19820.1

Model type
Protein coding
Short Description
LOB domain-containing protein 9
Computational Description
LOB domain-containing protein 9 (LBD9); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 5 (TAIR:AT1G36000.1); Has 821 Blast hits to 816 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR