Home
Mutant Lines
GT16492

GT16492

CSHL Arabidopsis genetrap mutant lines

Original: GT16492

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16492

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 183224 [Map]; Strand: c
- AT4G00420.1 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.2 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.3 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATATAA ATGCACAGTT 
ACAGAAAGAA CAGTGGCTAT TGCAATGAAG TAACCAAAAA GGAAAATAAA 
AAGGAGAGAC AGTTATCTAG GAGCTCACAG TTATGGCAAG AAGCTGAGCT 
TTTGGATTCC TGCTACCAAT CCGTTTTTTA AATGCCTTTC ACAACATCTT 
TTGCTTGCCT GCAAAACAGC AACCGCTTTC AGACACCACA TAAGATCGTC 
CAATTAGTAT AAACACTGAA ATATCCTTCT TCCAATCACA AAGCATAAAT 
ATTTCCCAGC TTCTACAATA AAGCCCTATG AAAGATGACT AACTTGAGCA 
AAACAGTAGG CCACAAGTAT TCGAATTGGT CCTAGAAAAC ATGGAAATAT 
CTAACTATGG TAAAGAAACG AAATTTGATT ATCTTAACTA TCTTAACTAT 
CTTAACTATC ATATATCTTT CCTCTCCTTA TCTAAAACCC TTTGATTAGA 
TTACAGAAAC AACACTTCAG TTCCTAAACA ACAATAGACA AATATCTTCT 
TTGCCTAAAC AACAAGACAG ACCCAAATAT TTAGTAGTTA AACAGCATTT 
TGCTAACCAC ACAAGACAAT TCAAATCACA CACACAAGAC ATTTTGCT

AT4G00420.1

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.2

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 72 Blast hits to 72 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.3

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR