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Mutant Lines
GT16516

GT16516

CSHL Arabidopsis genetrap mutant lines

Original: GT16516

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16516

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 17414513 [Map]; Strand: w
- AT4G36930.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon1 (CDS)

TTTACCGACC GTTACCGACC GTTTTCATCC CTATCCTCCG CCGATTAAAA 
CCTCAGAGAA ATCTCCGACA CGTTTCGACA TAAGCACAGA ATCTGACGGT 
GGATGATGAG AAACGAGACT TCTCGAGTTA TCTGCATGTG GGTCACCGCT 
CCCGTGCACA CCAATCAAAG ACGCCGTCGT TGTAGTCGTC GCCGGGGAGT 
AGTAAGAAGG TAAAGGAGAA GAACGGTCGA AAATATGCCG GAGAAACTGA 
GAGATTTCGT CGGAAGAAGA CGGAGGATGA TGAAGATGAT GATTGATACG 
AGTATCGTAA ACCGAGGAAG AAGAAGAAGA TGAAATCAAT TTCTTATCTC 
CCATCACTCT CTGCTTC

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT16516 - 5-prime edge
```
TGATGAAGCT CCCCTCTTCC
```

AT4G36930.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary: Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.
Computational Description: SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR