1. Home
  2. Mutant Lines
  3. GT16544

GT16544

CSHL Arabidopsis genetrap mutant lines

Original: GT16544

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16544

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 133884 [Map]; Strand: w
      • AT4G00310.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon1 (CDS)
      • AT4G00310.2 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16544 - 3-prime edge
    CGGTAGAGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAACCGA 
    TGACAGTTTC GTGTTCTTCC GAATCCTCAT TTTTTACCCA AAACAATACT
    TTGGCCCAAA AGAAACCAAA CACAAGTAAG AAGAAGATGT ATAAAATGCT
    CAATATATAA ATATTTTACA TCACCACGTA AGCTTATAAC TCGATTCACC
    TCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 133952 [Map]; Strand: w
      • AT4G00310.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon1 (CDS)
      • AT4G00310.2 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16544 - 5-prime edge
    CCTGCATCGG TTCTTTTATC GACAGCAGGT TGCGGCGGAG AGAGACCGGA 
    CACGTATGTG TGTCACTTAA ACCAGTCTCC ATGGGATGTG ATTCCTGTTT
    CTTCCTCCGG CGATTGCGAG TTAACTAACC TAGTCGACTC GTCGTGGTTC
    CTCCCTTTAT CGTCTTCGTC TT

AT4G00310.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 49 Blast hits to 49 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00310.2

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR