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GT16554

CSHL Arabidopsis genetrap mutant lines

Original: GT16554

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16554

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12378035 [Map]; Strand: w
      • AT4G23750.2 - [+] show detail - cytokinin response factor 2
        Distance: 13; Region: intergenic
      • AT4G23760.1 - [+] show detail - Cox19-like CHCH family protein
        Distance: -3810; Region: intergenic
    Flanking Genome Sequence: GT16554 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATTAAAG 
    AGAGCAGAGC ACGTGGAAGC AAAAAGAAAC TCGACCTCCC ATTATCGTTA 
    ACAGACGAAA ATTATTTTTC AAAACTTAAA ACGTTAATAA TTATCACCAT 
    TAACTTACAT TAATTCAATT TCATTCATAT TTTTATATAT AACAAAGAAA 
    AAAAGATTAC GAACATAACC GAGATTTTAT GTCACCGGTA TACAAAACTT 
    TCTCCGGTTC CGTTTAGTAA CGGCCGGTAT AACTATTTAT TTATTTAAAA 
    TATTATTAAA CAGCTAAAAG AGGATCCGAC CCGAATAGAT CCCCGATATC 
    TTGAAAATGG TCCTCCATGT GCCAGCTGGA TAATCCGGAT CCGAAATCGA 
    ATCCGAAGTT CATTCCCGTA CACAAATCCG CCGTGAATAG ATCTTCCCCA 
    AATAAATCGC CGCCGAGATA GTCGGGAACC ACTGAGCTCC GGAAATCGAA 
    CACGTCATCA TCTGAGAACA AGGGCGCCGA GAAATCAGAG AAAGTTTCAG 
    ATACCGTTGT CATGGATGGC TCTTCCTTGA CTACAACGGC CGCGACTGGT 
    GATGAAGAAA TGCCGGAGAA TTCGTCGACG GCGAAAGGAG ATCGGAGAAC 
    AGACACCGGA GAGCAGAGAC AATCGTTGCT GCTGCTTCTG CTGATGGAGG 
    AAGAAGCAGT AACGGATTTT TTGCTTTTGT TGTTTTTCTT CTTCTTCTTC

AT4G23750.2

Model type
Protein coding
Short Description
cytokinin response factor 2
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.
Computational Description
cytokinin response factor 2 (CRF2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 1 (TAIR:AT4G11140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23760.1

Model type
Protein coding
Short Description
Cox19-like CHCH family protein
Computational Description
Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR