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GT16570

CSHL Arabidopsis genetrap mutant lines

Original: GT16570

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16570

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22223997 [Map]; Strand: w
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: GT16570 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTT 
    CACACACATA ATTATGAGGT CTAAGTCACT TTTCTATGAG CAGGACGAAT 
    CGCAGAGTTT GATTCACCTG CCAAACTGCT ACAGAGAGAA GATTCTTTCT 
    TCTCCAAACT CATAAAAGAG TATTCGCTGA GATCTAATCA CTTTGCCGGC 
    TCGAATGATC TTCTCAGCTA AACACCACTA AAAGATGGAT GATCTTTTGC 
    AGAGAAAACG AAATATGAAT TCCACAGTTA AGCTTAAGTT GAAAGTCTAA 
    CTAGTTATTT AGTACTACAT AAGTTGAACA TAGAAATGGA GAGAGCACCA 
    TGGTTAGAAG CATGGCGCAT CGAAGAAAAT TCAGTTCAAC ATTTTAATCA 
    GTACTTGTGT TTTAGGTTCT ATACTGAGTT TTCAGTGTGT TCTTGGAGAA 
    CTATCCATGT AACCAATGGA ATAAAGCAGG AATCTATTGT TAATGCACGA 
    ATTAAACAAG TACGAAAATG GGATCTCTAG GGAAGGAAGA AGAATCTTTC 
    TATTAATGAC GAGCCCGCGA CTTAGGTGAA TTGGACGGAT TACAAAGGAT 
    GATTTCTTCA ACAAGCATAA ATGGAGTAAG AACGAGCCGA TTGTAGATGA 
    AAGACGAGCT TGAGGCCGGA AGACGATCTT GATAGCTGAA CCTTGTAAAA 
    GGCTGCCTAC GTACCCTTAG

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR