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GT16579

CSHL Arabidopsis genetrap mutant lines

Original: GT16579

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16579

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493679 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16579 - 5-prime edge 
    CTTATTGAGG ACTTTAAAAG GATAATTCCA CTTCTTAAAC CAAGCCTAAG 
    CCCTTCTTCT GTTGGCTCTG CAGGCAAATC CTTAGCTCCA ACAACTCCAA 
    CCATCCTTCT CAGCCAATTA GCCGCCTCAT ATCTCCTCGA TGCTACGCAA 
    ATGCAGATAA ACCATAAGCT CTTTCTCTAC AATTTACCAA AACTATCAAA 
    AGCTAAAAGC TAGTAGTCAC TCTAAGGAAG AAGAGAGCTA TTCAATTTTC 
    ACAATAAATT TTGAAACCCA TAACAACAAT TTTAATCAGA TCAAACATTC 
    TGTGTTATCG ATCATGGATG CTCAACT

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR