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GT16582

CSHL Arabidopsis genetrap mutant lines

Original: GT16582

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16582

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24218416 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -725; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16582 - 5-prime edge 
    TAGTCGTATC GTTCCTACTC GGCCTCCTTT TTCCCCAATT GGTAAGCGCT 
    TCAATTTCTC GTTCTCGATC CGAGCTTCGT TCTGATAATT TCTCTCTCCC 
    TTTGTTAGAG TGTTTAAGCA TCTGAATTAG CATTGTTTAA ATCTTAATTT 
    GATAAAATAG CAAATTAGTA TAAATGTTGT GTATTCTGCG GATATATGAA 
    GGTTAATACT TTTTGCAGGA AGAGTAACAG GCACCAGCAA CAACAGGGAG 
    CAGCCATGCG CTTCAGTTGA TACAGATAGT GTAGGAAAGG AGAATGCTAA 
    AGTTGAATTG CCCAAATTGA GTGTGGAGCG ACAACAGATG AAGAAGAAGA 
    AAAAGAATGC AGGGTTTAAT TTGCGCAAGA GTTTAGCATG GGATAGAGCT 
    TTTTCAACGG AAGAAGGTGA CTTTTTTTTA CCAATTTCCT GTTAGTAGTA 
    AAGGTCAAAG ATTTGGTCTA TGTTACTAAG AATCTTAAGA TGTGTGATAT 
    GGTCATGAAC CAG

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR