1. Home
  2. Mutant Lines
  3. GT16587

GT16587

CSHL Arabidopsis genetrap mutant lines

Original: GT16587

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16587

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 22120 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16587 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTG 
    TTCAGCCAAG CTAATCTCAT GCTTACCTCT AACCTATTTG CAACGAAGGC 
    TTCCATGCTA TAATAGCCTT TGGCTTTGAG CCACTCTAAT TCTACCCAAT 
    TGGACCCCAA ATCACTCTCT TCTCCTCTCA GAAATGCTCC ATCCGATAAG 
    ACGTCCATAG TCTCCACGAA ACGATCCACA TTTGTAAGAA ATTCCTCGGC 
    CATGACGACA GAATCGAGGG AATTGACGGA GCAAGAGCAA TCTTGAGCCC 
    TTTCCCCTTC TCCAGAACCA AAGAGCCGAG TAGAGTCGAA AACGAAACGC 
    TCTGACTCGT TGGACTCGGA AACCCTGGAG ATTAAGCCAC GAGATTTTTT 
    AAAGCAGAGA CTGGGGAGAT CGGAGGAGGA AGGGAGGTCT GGGAGGATGA 
    TGAAAGAGCA AGGGCCTTTA GTGCGGATAT AACCAAGCAT CTGAAGGAGG 
    ATTTGGACGA ACTTGGGATC AACGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 22115 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16587 - 3-prime edge 
    GTAGAGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTGTTCAG 
    CCAAGCTAAT CTCATGCTTA CCTCTAACCT ATTTGCAACG AAGGCTTCCA 
    TGCT

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR