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GT16604

CSHL Arabidopsis genetrap mutant lines

Original: GT16604

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16604

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9119501 [Map]; Strand: w
      • AT3G25020.1 - [+] show detail - receptor like protein 42
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16604 - 5-prime edge 
    TCCTACTTTC TCCCTGACTA CAGGGTTATT AAAAGTGAAG AAGCTTGAAG 
    GGGAGACACA AGAGAGTAAG AGTATCAAGA GGAAATTTAA ACGCAAAAGC 
    GATTCATACA TGGTCATCAG AAAATAATGG GTTTTGATTT AAGGAATATG 
    AGAGAGGATT TTGGGATAAA TAAAGATCGG AGATTGACTT GGAAGAAATC 
    AGAGCTAAGT GAAGTCTTTG CATTCGGGCT TCTAGAAAAG TGTGGCTGAT 
    AAGCCACTCA GAATCCACGT TAGATGTGAC TTTTCTAATG TATAATTTGG 
    ATTCGAGTCA CGTCACTTTG AAATTTCTCA CATATACAGN TACTCTTTAA 
    AGTACATGAA TAATAAACTT GGCAAAAGAA AAGTGAAAAA ACGATGACCC 
    GAAAGCACCG AGGAAAAGCT TAACAATTAT TTTTATTTTT CTATTCTTCT 
    ATTATATTAT TAATTTTTCA TTTTTCACAT GTTCCAAATA TTTAGTTTTT 
    CCAATTCCTA TTTTGAATTA AGTTTACTTC ATATTAATTT GCTACTCATA 
    TTATTGGTGT TGTTGCATTG ACTTGTAATT TTACCGTATC TGACTCTT

AT3G25020.1

Model type
Protein coding
Short Description
receptor like protein 42
Computational Description
receptor like protein 42 (RLP42); INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 40 (TAIR:AT3G24982.1); Has 101819 Blast hits to 28851 proteins in 1081 species: Archae - 42; Bacteria - 7146; Metazoa - 22681; Fungi - 1243; Plants - 63183; Viruses - 32; Other Eukaryotes - 7492 (source: NCBI BLink).
Link
InterPro Scan - TAIR