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GT16641

CSHL Arabidopsis genetrap mutant lines

Original: GT16641

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16641

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 595434 [Map]; Strand: w
      • AT2G02250.1 - [+] show detail - phloem protein 2-B2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16641 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCGGAA AGGTATATAT 
    ATTACATCGG TTTTTATTGA TACAATGGAA CAATTTTGGT GTAGTTGTCA 
    AGTTATACAT TTCATGCATC TATTGAGATA TTTATGATTG TTTTTATTGT 
    TTTAATTTTT GAATTATATC TTTTATTTTC CAAAAATATA GAGCTTCTGG 
    TTAGAGAAAG AGAATGGGAA AAAGTGTTTC ATGTTATCAC CGAAGAAATC 
    TATGTGGATC ACATGGGTTA GTACTCCTCA GTATTGGCGA TGGATTTCGA 
    TTCCTGAAGC TAGGTAGAAC TTCTTTTTTG GTCATTCTTT CCACATTCGA 
    CCAGNCACGC ATTCTCATGT TGATGATTAT GATGATACAC TCATGCAGGT 
    TTGAAGAAGT ACCAGAGCTG CTCAATGTGT GTTGGTTTGA GGTCCGAGGG 
    GGCATGAATA CTAAAGACCT ATCTCCTGGA ACCCGTTACT CGGCTTACAT 
    TGTGTTCAAG ACAAAGAATG GATGTCCTAA TTTGGGGGAT GTGCCAGCAG 
    AAGCTACAGT TGGATTGGTG GGACAAGAAT CTTCTCAAAG ACACATATAC 
    TTTGTTGGGC CTACGGATCA NAGGAGAGAC AGAGAAACGA GAGATGTAAC 
    GAGACCAACT AAAAGAAAAG ATGGTTGGAT GGAAGCTGAG CTTGGTCAAT 
    TCTTCAATGA GTCAGGTTGT GATGTCGTTG ACACAAGTAT TCTTGAGATT 
    AAGAATCCTA ATTGGAAGCG CGGTTTGATC ATTCAAGGAA TCGAATTCCG 
    TCCCACCAAA AGCCTGTTCT ATAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 595495 [Map]; Strand: w
      • AT2G02250.1 - [+] show detail - phloem protein 2-B2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16641 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GCTTTCCGCC TTCATCTCAC TCGACAAGAT 
    TGTCGCATAT AGCGAAATAG AGCTCCTTCT TCGATGAGAA AACTCGAGAT 
    GGAGGAACTA GAGACGAATA ATCCGATGGA AGAAACTTGT CCCACACGCT 
    ATCGGAATTA ACAGCCGATT CAAAGGTTTT CGAAACGGAA GCTGCAACGC 
    AAGCGTCACG AGGACTCGTG AAAGAGATGA TGTTGGAGAT GCAATCCTCC 
    GGTAAGTTAT CAAACAGTGA CGGTCCGGAG ATGATCGCTC CTCCGCTATG 
    TTTTTGCACC ATCGACGAAG AACCGGGATT TTTTCGGCCT TTGCCTCTAG 
    AGTCAACGCT TTGTTTGTGT CCCATTGTTG CTTGTAATAT CTTTCTTCAT 
    CTGGAAACTC AGAATTTAAA GAAATCTTCT AAAGTCGGCC TATGTTGTTA 
    AAAAATAGAA AATGACTCGT TTATAGTCGT CCACACATAT TTACGAAACT 
    ACCCTTATTC GCATCAATGC CCTGCCGCGT GCGTCCTTAC ACGTTCACGC 
    AACGCTGCCT GTTTTTTAAC TGACTATTGG TTTATTTTTT CAGAAAGCAA 
    ATTTTACTCT TGGGTTTGGT TTTTTCTTAT TAACAATGGT CTACAAAATC 
    TGAGAACTTT ACTAAGACCA GTTGATGTAC AGACACGTTC ATGTACATAA 
    ATTTATTCAT ATGTTATCCT GTCTCTATAG TTTTTGCTAA GTAAAGTGTA 
    CAAAAGCATT GTAGATGATT AAAACACGTT TTGATTTATT TATT

AT2G02250.1

Model type
Protein coding
Short Description
phloem protein 2-B2
Computational Description
phloem protein 2-B2 (PP2-B2); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR