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GT16642

CSHL Arabidopsis genetrap mutant lines

Original: GT16642

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16642

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1539954 [Map]; Strand: c
      • AT4G03460.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16642 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAATAATGT GTAAGGGTTT 
    TTCAAGTCTA CCTTATTTGT TTATTACAGA GAAAACAAGT CATGGTCCAA 
    AAGAAGAAAG CATTCAGTGG GATACTAAAA TATATAGAAA TCCAACGACT 
    TGTGGGTTTC TTCAACTTCT AATGTCAACT ATCTTAACCC AATTCAACAT 
    CTCTCCAAGC TACTATCCAA AAATTCCATT ACTCTCGAAA GTCTTGAAGA 
    AAAGCGGACG CAATAATAGG CTAATTAGCT ATCAAAAACG CAGACTTTTC 
    GGTCAACGAA TTAGAAAAAC AAACGGCGAC AAGACCGATC TCTTGTCGGT 
    TAGTCCATAT CAGATATTAT CCAATTAACG CTGTCAGGAC GCTGTTATGA 
    GACTAAGAGT AGTGCACACT ATCAAAGCCG TCCTCAATCC TCCACCTCTG 
    CGTTTCCGCC TCTCTTTTTC TGATATTGAT TGTTCCACCA TTTTACCTGT 
    GATACTGAGG GAGGTCGAAA CATCTGGAAT ATAACTCCGG CCGATTAGCC 
    GTCTCCGCCG CGTTTTGTCA CACCGACGAT TTCATTTGAA CGACGTTGTA 
    GGCTCACACA AGTCAAAAGT CGCACTCTTT AAGGTGTGTA ATATTGGGCC 
    TATAAAGTTT ACAGATGGCC CAGTTTCCAA TCAAAGCTTT TAACCTGAAC 
    GACGACGTTT TATAGAGTCT ATGTGAGCCT CC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1539948 [Map]; Strand: c
      • AT4G03460.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16642 - 3-prime edge 
    AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAA TAATGTGTAA 
    GGGTTTTTCA AGTCTACCTT ATTTGTTTAT TACAGAGAAA ACAAGTCATG 
    GTCCAAAAGA AGAAAGCATT CAGTGGGATA CTAAAATATA TAGAAATCCA 
    ACGACTTGTG GGTTTCTTCA ACTTCTAATG TCAACTATCT TAACCCAATT 
    CAACATCTCT CCAAGCTACT ATCCAAAAAT TCCATTACTC TCGAAAGTCT 
    TGAAGAAAAG CGGACGCAAT AATAGGCTAA TTAGCTATCA AAAACGCAGA 
    CTTTTCGGTC AACGAATTAG AAAAACAAAC GGCGACAAGA CCGATCTCTT 
    GTCGGTTAGT CCATATCAGA TATTATCCAA TTAACGCTGT CAGGACGCTG 
    TTATGAGACT AAGAGTAGTG CACACTATCA AAGCCGTCCT CAATCCTCCA 
    CCTCTGCGTT TCCGCCTCTC TTTTTCTGAT ATTGATTGTT CCACCATTTT 
    ACCTGTGATA CTGAGGGAGG TCGAAACATC TGGAATATAA CTCCGGCCGA 
    TTAGCCGTCT CCGCCGCGTT TTGTCACACC GACGATTTCA TTTGAACGAC 
    GTTGTAGGCT CACACAAGTC AAAAGTCGCA CTCTTTAAGG TGTGTAATAT 
    TGGGCCTATA AAGTTTACAG ATGGCCCAGT TTCCAATCAA AGCTTTTAAC 
    CTGAACGACG ACGTTTTATA GAGTCTATGT GAGCCTCCTG AAGCTTCGTT 
    AGAGTGTGAT TATTTCTTGC TTATTACTAC AGCCAGTCAG CCACGCTTCA 
    AGCATACAAT GATCAAACCA GACCGTCAAC ATTTAACGAA ATCAGTCTGA 
    TCTG

AT4G03460.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03500.1); Has 31827 Blast hits to 15474 proteins in 712 species: Archae - 44; Bacteria - 2495; Metazoa - 17236; Fungi - 2457; Plants - 2857; Viruses - 141; Other Eukaryotes - 6597 (source: NCBI BLink).
Link
InterPro Scan - TAIR