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GT16661

CSHL Arabidopsis genetrap mutant lines

Original: GT16661

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16661

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14848130 [Map]; Strand: w
      • AT4G30350.1 - [+] show detail - Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases super...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16661 - 3-prime edge
    GAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACGT 
    GTGGCCATGG TTACGACGTG TGGCTTCAGC AATCGACTGG TTTAAAACCG
    TCGCTGCTTC CGGCGTCAGC GTTTGCTGTA TAGTAATCAA ATCTGCTCTC
    ATCTCAAAAA AACTTTTCTC AACAAGAAGT TTTTTTTTTG GGTGGGGGTT
    CCTCCCCCTT TGGTTAACCT AAAAAAAAAA AAACCTTTGC ATAAAAAATT
    TTTAGGACCG GCCACAAAAT TTTTAAAAGG GCCCCAAAAA ATGGCAAAGG
    AAAAAAGTTG TTTATCCGGG TAAAAAAAAA AAAGGGTCCA ACCCCAAAAA
    AGGGTTTTTT ACAAAAAACC AAAAGCCCAA CCAACCGAAA GGGAAAAAAA
    CCAAACCTTT GGTTGAAATG GCCTTCCCCT TCCCCGGGGT TCCGGGGGTT
    TTGGCAGGGG GGGGGAAACC CCGGGGAAAA AAAAAAAAAT TTTGGGGAAA
    AAAAAAGAAA AAATGGAACC TTTGCCCTCC CCAAAAAGTT AAAACCCCCC
    CCATAATAAA AGCTTCCAAG GGGAACCTAT TGAAATTTTT CCACCCCCAA
    ATTTTATAGG GGCCTTTGGG GAAATACCAA AAGGGCCCTT TTGGGCCGGC
    GGCAATAGAA AAAAAAACCC TGGCTTGGAC CCCCAAAGCC ATA
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14848134 [Map]; Strand: w
      • AT4G30350.1 - [+] show detail - Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases super...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16661 - 3-prime edge
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACGTGTGGCC ATGGTTACGA CGTGTGGCTT CAGCAATCGA CTGGTTTAAA
    ACCGTCGCTG CTTCCGGCGT CAGCGTTTGC TGTATAGTAA TCAAATCTGC
    TCTCATCTCA AAAAAACTTT TCTCAACAAG AAGTTTTTTT TTTGGGTGGG
    GGTTCCTCCC CCTTTGGTTA ACCTAAAAAA AAAAAAACTT TTGCTTAAAA
    AATTTTTGGG ACCGGCCCCA AAATTTTTAA AAGGGTCCCA AAAAAATGCA
    AAGAAAAAAA TTTTTTTATT CGGGTAAAAA AAAAAAAGGG TTCAACCCCA
    AAAAAGGGTT TTTTCCAAAA AACCAAAAGC CCTTTCAACC AAAAGGGTAA
    AAAATCAAAC CTTTGGTTGA AATGGCCTTT CCCTTCCCCG GGGTTCCGGG
    GGTTTTCCCA GGGGGGGGGA AACCCCGGGG AAAAAAAAAA AAATTTTGGG
    GAAAAAAAAA GGAAAATTGG GATCTTTTCC CTTCCCAAAA AGTAAAAACC
    CCCCCCATAA TAAAACCTTC CTAGGGGAAC CTTTTGAAAT TTTTCCGCCC
    CCAAATTTTT TAGGGGGCTT GGGGGAAATT CCAAAAGGGC CCTTTTGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14848184 [Map]; Strand: w
      • AT4G30350.1 - [+] show detail - Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases super...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16661 - 5-prime edge
    TCCTACTTTA TCCCTGGCCA CCGACACCGT TACACGTGGC AGCTACTCTC 
    TTATCTTCTT CCTCTGGTTA TCTCCGACAA GCTTGTATCA AATCTCATCC
    AAACTCTTCT CACCCACTTC AGTGTCGAGC TCTTGAGCTC TGTTTCAGCG
    TCGCTCTCGA ACGTCTCCCT ACAACTACTA CAACAACCAC TACTTCGTCT
    TCTTCTTCTT C

AT4G30350.1

Model type
Protein coding
Short Description
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Computational Description
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 16030 Blast hits to 14793 proteins in 2754 species: Archae - 27; Bacteria - 12697; Metazoa - 12; Fungi - 280; Plants - 607; Viruses - 0; Other Eukaryotes - 2407 (source: NCBI BLink).
Link
InterPro Scan - TAIR