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GT16668

CSHL Arabidopsis genetrap mutant lines

Original: GT16668

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16668

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1734 [Map]; Strand: w
      • AT4G00005.1 - [+] show detail - PRA1 (Prenylated rab acceptor) family protein
        Distance: -198; Region: promoter
    Flanking Genome Sequence: GT16668 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTGCTT 
    CCGATTTCCA CCACCGCAAC AGCCAAGTCC GGATCAGCCT CCGATTGTAA 
    CTGATGTGGT GGAATCACAA CCTCCAACCG TCCATGCATT TGTCAACAGT 
    GTGACCAAGA CGGTTCGTGG TGGTCTATCT CGTAGCCGGC CGTGGTCAGA 
    GCTCCTCGAA CGATCTGCTT TTCACCAAGC TTGACTCTGT CTTCGAGGCC 
    ATGACGCGAT TCTGGAAGAA CTCCTCTTAT TTCAGGGTGA ATTACGTCTG 
    CATCATCGCT CTGATCCTCA GTTTCTCTCT TCCCGCCCCA CCCATTCTCG 
    CTCATCCTCC TCCTATGCCT CGCCGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1735 [Map]; Strand: w
      • AT4G00005.1 - [+] show detail - PRA1 (Prenylated rab acceptor) family protein
        Distance: -199; Region: promoter
    Flanking Genome Sequence: GT16668 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGTGCT 
    TCCGATTTCC ACCACCGCAA CAGCCAAGTC CGGATCAGCC TCCGATTGTA 
    ACTGATGTGG TGGAATCACA ACCTCCAACC GTCCATGCAT TTGTCAACAG 
    TGTGACCAAG ACGGTTCGTG GTGGTCTATC TCGTAGCCGG CCGTGGTCAG 
    AGCTCCTCGA ACGATCTGCT TTTCACCAAG CTTGACTCTG TCTTCGAGGC 
    CATGACGCGA TTCTGGAAGA ACTCCTCTTA TTTCAGGGTG AATTACGTCT 
    GCATCATCGC TCTGATCCTC AGTTTCTCTC TTCCCGCCCC ACCCATTCTC 
    GCTCATCCTC CTCCTATGCC TCGCCGCTT

AT4G00005.1

Model type
Protein coding
Short Description
PRA1 (Prenylated rab acceptor) family protein
Computational Description
PRA1 (Prenylated rab acceptor) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B5 (TAIR:AT5G01640.1); Has 274 Blast hits to 274 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 272; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR