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GT16688

CSHL Arabidopsis genetrap mutant lines

Original: GT16688

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16688

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3700116 [Map]; Strand: c
      • AT3G11700.1 - [+] show detail - FASCICLIN-like arabinogalactan protein 18 precursor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16688 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGGG 
    CTAAAGAAGC TGATGGCTCG GTTAAATTCG GCTCTGGTGA CCGGATCGGA
    CTTATTTGTT TGATCCGGAT CATTATACCC GATAGGAAAA AATTTGGATA
    ATCAATGTGA GGGGGACAAA ATATAGATAA ACCTCACTCA CTCACATTTG
    TATAAATAAA AGCATTCATC TACACTCGAC GATCAGCCGA GAAGAGGTAC
    GTTTGATTCA TCTCTCGCGA CAATCAATTG TGTTGTGTGT TTATTGTTAA
    TTGATTCGGT GACATTAGTT ATAGGTGAAA TGATCTAATG TAGATTCATC
    GAATTTTCTT ATAACATGAC CATTGTGACT TGTGAGGGAC TAATTATGCT
    TATAATTGTG TCATGTTACA CGGATACAAG TTATAGCTTT TGGGTTTGTG
    GTTGCTTGAA TTGTGATTTT TAGTACATGA TTAAGGCTAT TAAGATTCAA
    GACATTGGAT TATTCCTATA ATCTCCGGCG AAATGGGATA TTTCCGGTGA
    GAAGTAATAG AATTCCGGTG AGAAGTCATA GAATTGAAGA TTTTGTGAGG
    ATATTTCAAT CAGAAGAAAG AACATTAGAA GCTTCTTCAC ATTAGCTAAA
    AGCATCTTCT CACGTTTACA AACTTCACTT ATTATATTGC TTAATTAAAT
    TATTGGGTTT TA

AT3G11700.1

Model type
Protein coding
Short Description
FASCICLIN-like arabinogalactan protein 18 precursor
Computational Description
FASCICLIN-like arabinogalactan protein 18 precursor (FLA18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cyclopentenone, cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1); Has 488 Blast hits to 470 proteins in 128 species: Archae - 2; Bacteria - 195; Metazoa - 32; Fungi - 4; Plants - 192; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR