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GT16692

CSHL Arabidopsis genetrap mutant lines

Original: GT16692

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16692

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30375716 [Map]; Strand: w
      • AT1G80830.1 - [+] show detail - natural resistance-associated macrophage protein 1
        Distance: -20; Region: promoter
      • AT1G80831.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -655; Region: promoter
    Flanking Genome Sequence: GT16692 - 3-prime edge 
    ACGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACATC 
    CATTATATGT ATATATATCG TTGTGGAGTT GTTGTATACT AAACAAGAAA 
    GAGATTAGGA AGAGAGAGAC GGCGATGGCG GCTACAGGAT CTGGACGGTC 
    TCAATTCATT TCTCACTCGA CCACGGTAAC CGAAGCTTCT CCAATTCTCC 
    ACTCATCGAG AACTCTGATT CTAATCAGAT TATTGTCTCT GAGGTCATTT 
    CTTCTTCTTT TTTCTTTTGT TGTTGATTTT ATAATCTCTT TTTAAATCTG 
    TTGATTGATT TGGCTTTGTA AATCTGTTTT TATGTTTTAA CATAACTCAC 
    ATGCGTACCA GTTTCTGAGT CAAGAAATCG TTTTCAGAGT CAACATATCA 
    GAAGACTAAA CAAAAAACAC AGAGAATCTT GATTCAAAAA AATGATAATG 
    AGTTTGTTTT GAATCATCAA CTTTGCAGAA GAAGAGCTGG AAGAATTTCT 
    TTGCTTACTT AGGCCCTGGT TTTCTTGTTT CAATCGCATA TATTGATCCT 
    GGAAACTGTA AGCACATTAC TCTCTCTTTT TTTTTAATAA TCTGTAAAGA 
    TTTGAGATGA TTCATTCTTG TTTCTTCTTC CTGTGTTCTG CAGTTGAGAC 
    TGATCTGCAA GCTGGAGCAC ACTACAAGTA TGAAGTGCGT TCATACTCTC 
    CTTCCCTCGC TTTTATCTTA TACTAGTTTG CATTTTTTAC AAAATCATGA 
    TTTCTTTCTT TGTAATAACA GTTACTTT

AT1G80830.1

Model type
Protein coding
Short Description
natural resistance-associated macrophage protein 1
Curator Summary
Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.
Computational Description
natural resistance-associated macrophage protein 1 (NRAMP1); CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 6 (TAIR:AT1G15960.1); Has 5566 Blast hits to 5511 proteins in 1695 species: Archae - 118; Bacteria - 4154; Metazoa - 357; Fungi - 273; Plants - 337; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80831.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR