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GT16693

CSHL Arabidopsis genetrap mutant lines

Original: GT16693

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16693

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24165008 [Map]; Strand: w
      • AT1G65050.1 - [+] show detail - TRAF-like superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16693 - 3-prime edge 
    GATGTTGAAG TTAAGAGGTT CAATTCCTCA AAAACGGTTT GGGGATTGTC 
    ACAAGTTCTT CCGGTTGAAA CACTCAAAGA CCGTGCAAAG GGATTTATCT 
    TGTCAAGATT GTTTCACAAC CCGCCTCTTT TGGTGAAGTT CTCCCTTTTC 
    ACAAATTCTC TTGGAGTATT CGTGATTTCG CTCTCCTAGA ACAGAATGAT 
    TGCGTATCCA AAACCTTTCA CATGGGAGAA AAAGATTGGT GAGTTTTTTT 
    TGTTCTGATA GATATTGTTG TATGTGTGCA ATAGTGGTAA CTTGCTAACA 
    AGTGGATGGT TATGTACTTA TGTTTCAAAG GACTCTAAAG TTGTATCCAA 
    AGGGGGACTC TGAGGCAGAT GACAAGTTAT CCCAGCATTT GCATTTAGCT 
    GACGGGGAAA CTTTATCCAA GGGTGAGCTG ATTTTCGTGC GAGTGAACCT 
    GCAGGTTCTA GACCCGCGTG GATCCAATCA CCTTAAAGGA TGGCGTAAGT 
    CAAAAACTAT TGATGTTACG ATTTCGCATG GGATAAATTA GGAGCTGATG 
    ACATTTTCAA TAGACGTTCT TAACTTGTGA TGTCAAATGT CTTACTCCTT 
    TAACATACAT TTCTTGTTTT TGTAGTTAAA GGTTGGATCA TGAACTCGAA 
    CAAAGAGATG GGTCTTCCTC A

AT1G65050.1

Model type
Protein coding
Short Description
TRAF-like superfamily protein
Computational Description
TRAF-like superfamily protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT1G65150.2); Has 362 Blast hits to 327 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 335; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR